Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 BCL2-203ENST00000589955 5011 ntBASIC15.17■□□□□ 0.02
HIST1H1AQ02539 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1AQ02539 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 AL158211.5-201ENST00000623583 2518 ntBASIC15.16■□□□□ 0.02
HIST1H1AQ02539 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 TCF3P1-201ENST00000423021 1937 ntBASIC15.16■□□□□ 0.02
HIST1H1AQ02539 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 AC097381.1-201ENST00000429019 1296 ntBASIC15.16■□□□□ 0.02
HIST1H1AQ02539 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H1AQ02539 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.15■□□□□ 0.02
HIST1H1AQ02539 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.15■□□□□ 0.02
HIST1H1AQ02539 AC137761.2-201ENST00000561729 223 ntBASIC15.15■□□□□ 0.02
HIST1H1AQ02539 AC145350.3-201ENST00000569033 163 ntBASIC15.15■□□□□ 0.02
HIST1H1AQ02539 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 AC087623.3-201ENST00000607047 1098 ntBASIC15.15■□□□□ 0.02
HIST1H1AQ02539 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms