Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.49■□□□□ 0.39
NKX6-1P78426 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 AC006128.1-201ENST00000624704 1661 ntBASIC17.48■□□□□ 0.39
NKX6-1P78426 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.48■□□□□ 0.39
NKX6-1P78426 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
NKX6-1P78426 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NKX6-1P78426 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.48■□□□□ 0.39
NKX6-1P78426 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.48■□□□□ 0.39
NKX6-1P78426 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 POM121L13P-201ENST00000422362 380 ntBASIC17.48■□□□□ 0.39
NKX6-1P78426 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.48■□□□□ 0.39
NKX6-1P78426 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.48■□□□□ 0.39
NKX6-1P78426 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.48■□□□□ 0.39
NKX6-1P78426 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.48■□□□□ 0.39
NKX6-1P78426 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.48■□□□□ 0.39
NKX6-1P78426 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NKX6-1P78426 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-1P78426 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
NKX6-1P78426 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.47■□□□□ 0.39
NKX6-1P78426 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.47■□□□□ 0.39
NKX6-1P78426 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.47■□□□□ 0.39
NKX6-1P78426 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NKX6-1P78426 AC012618.2-201ENST00000428058 849 ntBASIC17.47■□□□□ 0.39
NKX6-1P78426 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.47■□□□□ 0.39
NKX6-1P78426 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NKX6-1P78426 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
NKX6-1P78426 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NKX6-1P78426 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NKX6-1P78426 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.47■□□□□ 0.39
NKX6-1P78426 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-1P78426 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-1P78426 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX6-1P78426 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-1P78426 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NKX6-1P78426 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX6-1P78426 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX6-1P78426 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NKX6-1P78426 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-1P78426 RPS2P55-201ENST00000397318 883 ntBASIC17.46■□□□□ 0.39
NKX6-1P78426 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.46■□□□□ 0.39
NKX6-1P78426 AC107956.1-201ENST00000494359 873 ntBASIC17.46■□□□□ 0.39
NKX6-1P78426 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.46■□□□□ 0.39
NKX6-1P78426 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-1P78426 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX6-1P78426 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.46■□□□□ 0.39
NKX6-1P78426 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.46■□□□□ 0.39
NKX6-1P78426 AC233702.5-201ENST00000584107 538 ntBASIC17.46■□□□□ 0.39
NKX6-1P78426 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NKX6-1P78426 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NKX6-1P78426 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-1P78426 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-1P78426 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX6-1P78426 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.46■□□□□ 0.39
NKX6-1P78426 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-1P78426 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX6-1P78426 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
NKX6-1P78426 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NKX6-1P78426 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.46■□□□□ 0.38
NKX6-1P78426 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
NKX6-1P78426 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NKX6-1P78426 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NKX6-1P78426 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms