Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TSPY20P-201ENST00000450910 630 ntBASIC18.21■□□□□ 0.51
CLDN20P56880 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN20P56880 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN20P56880 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN20P56880 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN20P56880 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN20P56880 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN20P56880 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
CLDN20P56880 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
CLDN20P56880 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN20P56880 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN20P56880 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLDN20P56880 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLDN20P56880 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.2■□□□□ 0.5
CLDN20P56880 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN20P56880 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CLDN20P56880 AC060766.5-201ENST00000590539 871 ntBASIC18.2■□□□□ 0.5
CLDN20P56880 HLA-B-256ENST00000639848 1089 ntBASIC18.2■□□□□ 0.5
CLDN20P56880 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN20P56880 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN20P56880 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN20P56880 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN20P56880 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN20P56880 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN20P56880 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN20P56880 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN20P56880 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.19■□□□□ 0.5
CLDN20P56880 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN20P56880 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN20P56880 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLDN20P56880 AC092368.3-202ENST00000574180 1591 ntBASIC18.19■□□□□ 0.5
CLDN20P56880 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
CLDN20P56880 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN20P56880 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CLDN20P56880 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CLDN20P56880 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLDN20P56880 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN20P56880 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN20P56880 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN20P56880 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN20P56880 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN20P56880 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.18■□□□□ 0.5
CLDN20P56880 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN20P56880 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN20P56880 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.18■□□□□ 0.5
CLDN20P56880 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN20P56880 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN20P56880 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN20P56880 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN20P56880 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CLDN20P56880 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN20P56880 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CLDN20P56880 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN20P56880 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 ABHD17AP1-201ENST00000358206 933 ntBASIC18.17■□□□□ 0.5
CLDN20P56880 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CLDN20P56880 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CLDN20P56880 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms