Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.27■□□□□ 0.68
EMP3P54852 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.27■□□□□ 0.68
EMP3P54852 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
EMP3P54852 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.27■□□□□ 0.68
EMP3P54852 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.27■□□□□ 0.68
EMP3P54852 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EMP3P54852 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EMP3P54852 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.27■□□□□ 0.67
EMP3P54852 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EMP3P54852 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EMP3P54852 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
EMP3P54852 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.26■□□□□ 0.67
EMP3P54852 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
EMP3P54852 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.26■□□□□ 0.67
EMP3P54852 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.26■□□□□ 0.67
EMP3P54852 RNA5SP413-201ENST00000516373 109 ntBASIC19.26■□□□□ 0.67
EMP3P54852 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC19.26■□□□□ 0.67
EMP3P54852 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
EMP3P54852 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.26■□□□□ 0.67
EMP3P54852 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
EMP3P54852 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
EMP3P54852 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.25■□□□□ 0.67
EMP3P54852 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
EMP3P54852 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.25■□□□□ 0.67
EMP3P54852 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
EMP3P54852 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.25■□□□□ 0.67
EMP3P54852 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.25■□□□□ 0.67
EMP3P54852 UNC93B5-201ENST00000530315 699 ntBASIC19.25■□□□□ 0.67
EMP3P54852 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC19.25■□□□□ 0.67
EMP3P54852 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.25■□□□□ 0.67
EMP3P54852 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
EMP3P54852 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.25■□□□□ 0.67
EMP3P54852 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.25■□□□□ 0.67
EMP3P54852 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
EMP3P54852 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.25■□□□□ 0.67
EMP3P54852 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EMP3P54852 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EMP3P54852 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.25■□□□□ 0.67
EMP3P54852 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.24■□□□□ 0.67
EMP3P54852 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.24■□□□□ 0.67
EMP3P54852 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.24■□□□□ 0.67
EMP3P54852 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.24■□□□□ 0.67
EMP3P54852 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.24■□□□□ 0.67
EMP3P54852 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EMP3P54852 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms