Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP1B3P54709 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
ATP1B3P54709 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP1B3P54709 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
ATP1B3P54709 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP1B3P54709 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
ATP1B3P54709 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ATP1B3P54709 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP1B3P54709 KRT18P5-201ENST00000436075 1291 ntBASIC17.21■□□□□ 0.35
ATP1B3P54709 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP1B3P54709 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP1B3P54709 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ATP1B3P54709 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
ATP1B3P54709 HCG11-201ENST00000411553 5696 ntBASIC17.21■□□□□ 0.35
ATP1B3P54709 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP1B3P54709 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP1B3P54709 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
ATP1B3P54709 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.21■□□□□ 0.34
ATP1B3P54709 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ATP1B3P54709 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ATP1B3P54709 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ATP1B3P54709 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.21■□□□□ 0.34
ATP1B3P54709 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
ATP1B3P54709 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ATP1B3P54709 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 BX119927.1-201ENST00000636596 1552 ntBASIC17.2■□□□□ 0.34
ATP1B3P54709 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ATP1B3P54709 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP1B3P54709 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 AC016405.3-201ENST00000607710 860 ntBASIC17.2■□□□□ 0.34
ATP1B3P54709 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP1B3P54709 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP1B3P54709 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP1B3P54709 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ATP1B3P54709 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ATP1B3P54709 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP1B3P54709 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP1B3P54709 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATP1B3P54709 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATP1B3P54709 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP1B3P54709 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP1B3P54709 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATP1B3P54709 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP1B3P54709 MCRIP2P1-201ENST00000394346 511 ntBASIC17.19■□□□□ 0.34
ATP1B3P54709 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP1B3P54709 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
ATP1B3P54709 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ATP1B3P54709 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.19■□□□□ 0.34
ATP1B3P54709 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.19■□□□□ 0.34
ATP1B3P54709 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP1B3P54709 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP1B3P54709 AC100791.3-201ENST00000617619 330 ntBASIC17.19■□□□□ 0.34
ATP1B3P54709 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ATP1B3P54709 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP1B3P54709 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms