Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLNS1AP54105 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.73■□□□□ 0.75
CLNS1AP54105 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLNS1AP54105 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLNS1AP54105 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLNS1AP54105 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.73■□□□□ 0.75
CLNS1AP54105 AL354811.1-201ENST00000610286 706 ntBASIC19.73■□□□□ 0.75
CLNS1AP54105 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.73■□□□□ 0.75
CLNS1AP54105 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLNS1AP54105 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLNS1AP54105 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLNS1AP54105 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.73■□□□□ 0.75
CLNS1AP54105 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.73■□□□□ 0.75
CLNS1AP54105 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.73■□□□□ 0.75
CLNS1AP54105 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.73■□□□□ 0.75
CLNS1AP54105 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLNS1AP54105 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLNS1AP54105 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.72■□□□□ 0.75
CLNS1AP54105 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.72■□□□□ 0.75
CLNS1AP54105 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLNS1AP54105 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLNS1AP54105 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLNS1AP54105 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLNS1AP54105 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLNS1AP54105 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.72■□□□□ 0.75
CLNS1AP54105 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.72■□□□□ 0.75
CLNS1AP54105 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.72■□□□□ 0.75
CLNS1AP54105 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CLNS1AP54105 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLNS1AP54105 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.72■□□□□ 0.75
CLNS1AP54105 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLNS1AP54105 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.72■□□□□ 0.75
CLNS1AP54105 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.71■□□□□ 0.75
CLNS1AP54105 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 AC061975.6-201ENST00000579045 1553 ntBASIC19.71■□□□□ 0.75
CLNS1AP54105 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.71■□□□□ 0.75
CLNS1AP54105 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 AP000997.3-201ENST00000623333 2250 ntBASIC19.71■□□□□ 0.75
CLNS1AP54105 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.71■□□□□ 0.75
CLNS1AP54105 TPRG1LP1-201ENST00000598702 760 ntBASIC19.71■□□□□ 0.75
CLNS1AP54105 AC008175.2-201ENST00000612840 297 ntBASIC19.71■□□□□ 0.75
CLNS1AP54105 AC110285.6-201ENST00000617652 491 ntBASIC19.71■□□□□ 0.75
CLNS1AP54105 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.71■□□□□ 0.75
CLNS1AP54105 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CLNS1AP54105 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.71■□□□□ 0.75
CLNS1AP54105 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.71■□□□□ 0.75
CLNS1AP54105 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CLNS1AP54105 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.71■□□□□ 0.75
CLNS1AP54105 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLNS1AP54105 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.71■□□□□ 0.75
CLNS1AP54105 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.7■□□□□ 0.74
CLNS1AP54105 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLNS1AP54105 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.7■□□□□ 0.74
CLNS1AP54105 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLNS1AP54105 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLNS1AP54105 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 POU5F1P4-201ENST00000413175 1085 ntBASIC19.7■□□□□ 0.74
CLNS1AP54105 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.7■□□□□ 0.74
CLNS1AP54105 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.7■□□□□ 0.74
CLNS1AP54105 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.7■□□□□ 0.74
CLNS1AP54105 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 AL136967.2-201ENST00000623968 743 ntBASIC19.7■□□□□ 0.74
CLNS1AP54105 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.7■□□□□ 0.74
CLNS1AP54105 FP700111.2-201ENST00000619190 1892 ntBASIC19.7■□□□□ 0.74
CLNS1AP54105 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLNS1AP54105 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.69■□□□□ 0.74
CLNS1AP54105 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLNS1AP54105 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 AC099778.1-201ENST00000568593 1911 ntBASIC19.69■□□□□ 0.74
CLNS1AP54105 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.69■□□□□ 0.74
CLNS1AP54105 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.69■□□□□ 0.74
CLNS1AP54105 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLNS1AP54105 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms