Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HMGA2P52926 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HMGA2P52926 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 LINC01465-201ENST00000408887 1940 ntBASIC18.17■□□□□ 0.5
HMGA2P52926 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HMGA2P52926 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGA2P52926 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGA2P52926 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
HMGA2P52926 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGA2P52926 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.17■□□□□ 0.5
HMGA2P52926 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA2P52926 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGA2P52926 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA2P52926 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA2P52926 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.16■□□□□ 0.5
HMGA2P52926 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA2P52926 AC016405.3-201ENST00000607710 860 ntBASIC18.16■□□□□ 0.5
HMGA2P52926 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.16■□□□□ 0.5
HMGA2P52926 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA2P52926 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA2P52926 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA2P52926 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA2P52926 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HMGA2P52926 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGA2P52926 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA2P52926 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
HMGA2P52926 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGA2P52926 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.15■□□□□ 0.5
HMGA2P52926 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGA2P52926 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGA2P52926 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.14■□□□□ 0.5
HMGA2P52926 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
HMGA2P52926 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HMGA2P52926 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
HMGA2P52926 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.14■□□□□ 0.49
HMGA2P52926 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HMGA2P52926 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
HMGA2P52926 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 MCRIP2P1-201ENST00000394346 511 ntBASIC18.14■□□□□ 0.49
HMGA2P52926 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HMGA2P52926 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.14■□□□□ 0.49
HMGA2P52926 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGA2P52926 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HMGA2P52926 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGA2P52926 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.14■□□□□ 0.49
HMGA2P52926 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGA2P52926 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HMGA2P52926 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HMGA2P52926 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGA2P52926 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HMGA2P52926 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
HMGA2P52926 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
HMGA2P52926 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGA2P52926 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms