Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBP50607 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TUBP50607 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.93■□□□□ 0.94
TUBP50607 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBP50607 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBP50607 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TUBP50607 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TUBP50607 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TUBP50607 AC133681.1-201ENST00000465482 601 ntBASIC20.93■□□□□ 0.94
TUBP50607 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.93■□□□□ 0.94
TUBP50607 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.93■□□□□ 0.94
TUBP50607 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.93■□□□□ 0.94
TUBP50607 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.93■□□□□ 0.94
TUBP50607 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TUBP50607 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TUBP50607 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.93■□□□□ 0.94
TUBP50607 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TUBP50607 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TUBP50607 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TUBP50607 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TUBP50607 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBP50607 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TUBP50607 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.93■□□□□ 0.94
TUBP50607 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBP50607 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBP50607 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBP50607 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBP50607 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
TUBP50607 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.92■□□□□ 0.94
TUBP50607 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.92■□□□□ 0.94
TUBP50607 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.92■□□□□ 0.94
TUBP50607 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.92■□□□□ 0.94
TUBP50607 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBP50607 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.92■□□□□ 0.94
TUBP50607 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBP50607 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.92■□□□□ 0.94
TUBP50607 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.92■□□□□ 0.94
TUBP50607 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.92■□□□□ 0.94
TUBP50607 AL031963.3-201ENST00000606441 850 ntBASIC20.92■□□□□ 0.94
TUBP50607 FAM197Y4-202ENST00000622692 608 ntBASIC20.92■□□□□ 0.94
TUBP50607 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TUBP50607 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBP50607 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBP50607 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBP50607 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.92■□□□□ 0.94
TUBP50607 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.92■□□□□ 0.94
TUBP50607 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.92■□□□□ 0.94
TUBP50607 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TUBP50607 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.92■□□□□ 0.94
TUBP50607 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.92■□□□□ 0.94
TUBP50607 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TUBP50607 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TUBP50607 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.91■□□□□ 0.94
TUBP50607 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 KRT8P20-201ENST00000423953 1409 ntBASIC20.91■□□□□ 0.94
TUBP50607 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.91■□□□□ 0.94
TUBP50607 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.91■□□□□ 0.94
TUBP50607 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TUBP50607 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.91■□□□□ 0.94
TUBP50607 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.91■□□□□ 0.94
TUBP50607 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.91■□□□□ 0.94
TUBP50607 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.91■□□□□ 0.94
TUBP50607 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBP50607 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TUBP50607 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBP50607 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TUBP50607 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.9■□□□□ 0.94
TUBP50607 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TUBP50607 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.9■□□□□ 0.94
TUBP50607 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.9■□□□□ 0.94
TUBP50607 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.9■□□□□ 0.94
TUBP50607 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.9■□□□□ 0.94
TUBP50607 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.9■□□□□ 0.94
TUBP50607 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TUBP50607 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.9■□□□□ 0.94
TUBP50607 AL121829.2-201ENST00000620908 328 ntBASIC20.9■□□□□ 0.94
TUBP50607 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBP50607 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TUBP50607 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBP50607 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBP50607 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.9■□□□□ 0.94
TUBP50607 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBP50607 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBP50607 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TUBP50607 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TUBP50607 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TUBP50607 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TUBP50607 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms