Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP13P45452 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP13P45452 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP13P45452 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP13P45452 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP13P45452 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP13P45452 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP13P45452 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP13P45452 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP13P45452 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MMP13P45452 GUSBP6-202ENST00000438529 1198 ntBASIC20.67■□□□□ 0.9
MMP13P45452 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.67■□□□□ 0.9
MMP13P45452 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.67■□□□□ 0.9
MMP13P45452 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP13P45452 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MMP13P45452 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP13P45452 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MMP13P45452 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP13P45452 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP13P45452 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP13P45452 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP13P45452 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
MMP13P45452 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
MMP13P45452 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP13P45452 LSM12P1-201ENST00000411836 588 ntBASIC20.66■□□□□ 0.9
MMP13P45452 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP13P45452 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.66■□□□□ 0.9
MMP13P45452 AL109923.1-201ENST00000618799 583 ntBASIC20.66■□□□□ 0.9
MMP13P45452 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
MMP13P45452 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MMP13P45452 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP13P45452 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP13P45452 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.65■□□□□ 0.9
MMP13P45452 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.65■□□□□ 0.9
MMP13P45452 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MMP13P45452 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.65■□□□□ 0.9
MMP13P45452 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.65■□□□□ 0.9
MMP13P45452 MIPEPP3-201ENST00000412105 444 ntBASIC20.65■□□□□ 0.9
MMP13P45452 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.65■□□□□ 0.9
MMP13P45452 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.65■□□□□ 0.9
MMP13P45452 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MMP13P45452 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.65■□□□□ 0.9
MMP13P45452 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MMP13P45452 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP13P45452 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MMP13P45452 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
MMP13P45452 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MMP13P45452 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MMP13P45452 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.64■□□□□ 0.89
MMP13P45452 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.64■□□□□ 0.89
MMP13P45452 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MMP13P45452 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MMP13P45452 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
MMP13P45452 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MMP13P45452 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MMP13P45452 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MMP13P45452 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MMP13P45452 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.64■□□□□ 0.89
MMP13P45452 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.63■□□□□ 0.89
MMP13P45452 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.63■□□□□ 0.89
MMP13P45452 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.63■□□□□ 0.89
MMP13P45452 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.63■□□□□ 0.89
MMP13P45452 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.63■□□□□ 0.89
MMP13P45452 AC104771.1-201ENST00000603335 964 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms