Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RPL13AP40429 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.73□□□□□ -0.21
RPL13AP40429 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RPL13AP40429 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.72□□□□□ -0.21
RPL13AP40429 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.72□□□□□ -0.21
RPL13AP40429 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 AC008406.3-201ENST00000620001 1374 ntBASIC13.72□□□□□ -0.21
RPL13AP40429 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.72□□□□□ -0.21
RPL13AP40429 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL13AP40429 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL13AP40429 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC13.72□□□□□ -0.21
RPL13AP40429 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.72□□□□□ -0.21
RPL13AP40429 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL13AP40429 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
RPL13AP40429 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RPL13AP40429 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.72□□□□□ -0.21
RPL13AP40429 LTB4R2-202ENST00000528054 3092 ntBASIC13.72□□□□□ -0.21
RPL13AP40429 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL13AP40429 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RPL13AP40429 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL13AP40429 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.71□□□□□ -0.21
RPL13AP40429 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RPL13AP40429 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.71□□□□□ -0.21
RPL13AP40429 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.71□□□□□ -0.21
RPL13AP40429 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.71□□□□□ -0.21
RPL13AP40429 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.71□□□□□ -0.21
RPL13AP40429 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
RPL13AP40429 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 SENP5-202ENST00000419026 973 ntTSL 3 BASIC13.71□□□□□ -0.21
RPL13AP40429 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.71□□□□□ -0.21
RPL13AP40429 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC13.71□□□□□ -0.21
RPL13AP40429 CLTA-210ENST00000540080 989 ntTSL 2 BASIC13.71□□□□□ -0.21
RPL13AP40429 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.71□□□□□ -0.21
RPL13AP40429 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.71□□□□□ -0.21
RPL13AP40429 MIR6722-201ENST00000617286 78 ntBASIC13.71□□□□□ -0.21
RPL13AP40429 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC13.71□□□□□ -0.21
RPL13AP40429 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.71□□□□□ -0.21
RPL13AP40429 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.71□□□□□ -0.21
RPL13AP40429 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RPL13AP40429 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.71□□□□□ -0.21
RPL13AP40429 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RPL13AP40429 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL13AP40429 OR7E47P-201ENST00000546390 1422 ntBASIC13.71□□□□□ -0.22
RPL13AP40429 AC007225.1-201ENST00000566331 1836 ntBASIC13.71□□□□□ -0.22
RPL13AP40429 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPL13AP40429 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPL13AP40429 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPL13AP40429 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPL13AP40429 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
RPL13AP40429 AL162377.1-201ENST00000618844 1793 ntBASIC13.71□□□□□ -0.22
RPL13AP40429 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RPL13AP40429 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPL13AP40429 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.7□□□□□ -0.22
RPL13AP40429 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms