Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.98■□□□□ 0.95
CHKAP35790 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 TCF3P1-201ENST00000423021 1937 ntBASIC20.98■□□□□ 0.95
CHKAP35790 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CHKAP35790 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.98■□□□□ 0.95
CHKAP35790 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.98■□□□□ 0.95
CHKAP35790 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.98■□□□□ 0.95
CHKAP35790 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.98■□□□□ 0.95
CHKAP35790 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHKAP35790 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CHKAP35790 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHKAP35790 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHKAP35790 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHKAP35790 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHKAP35790 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.97■□□□□ 0.95
CHKAP35790 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHKAP35790 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.97■□□□□ 0.95
CHKAP35790 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CHKAP35790 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.97■□□□□ 0.95
CHKAP35790 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHKAP35790 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.97■□□□□ 0.95
CHKAP35790 AC008403.3-201ENST00000598924 454 ntBASIC20.97■□□□□ 0.95
CHKAP35790 MIR2861-201ENST00000636310 90 ntBASIC20.97■□□□□ 0.95
CHKAP35790 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHKAP35790 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.97■□□□□ 0.95
CHKAP35790 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHKAP35790 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHKAP35790 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CHKAP35790 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHKAP35790 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHKAP35790 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.96■□□□□ 0.95
CHKAP35790 AC092720.2-201ENST00000602388 1665 ntBASIC20.96■□□□□ 0.95
CHKAP35790 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHKAP35790 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.96■□□□□ 0.95
CHKAP35790 PRORSD1P-201ENST00000295112 541 ntBASIC20.96■□□□□ 0.95
CHKAP35790 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHKAP35790 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHKAP35790 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHKAP35790 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.96■□□□□ 0.95
CHKAP35790 AC128676.1-201ENST00000454392 318 ntBASIC20.96■□□□□ 0.95
CHKAP35790 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.96■□□□□ 0.95
CHKAP35790 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
CHKAP35790 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CHKAP35790 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHKAP35790 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHKAP35790 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
CHKAP35790 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CHKAP35790 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHKAP35790 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHKAP35790 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHKAP35790 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHKAP35790 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHKAP35790 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHKAP35790 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHKAP35790 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.95■□□□□ 0.94
CHKAP35790 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHKAP35790 AC008687.6-201ENST00000596318 630 ntBASIC20.95■□□□□ 0.94
CHKAP35790 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHKAP35790 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHKAP35790 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHKAP35790 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHKAP35790 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.95■□□□□ 0.94
CHKAP35790 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHKAP35790 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHKAP35790 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHKAP35790 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CHKAP35790 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHKAP35790 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.94■□□□□ 0.94
CHKAP35790 KRT17P3-201ENST00000420566 1262 ntBASIC20.94■□□□□ 0.94
CHKAP35790 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHKAP35790 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.94■□□□□ 0.94
CHKAP35790 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHKAP35790 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHKAP35790 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.94■□□□□ 0.94
CHKAP35790 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHKAP35790 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHKAP35790 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHKAP35790 KRT8P36-201ENST00000489121 1440 ntBASIC20.94■□□□□ 0.94
CHKAP35790 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHKAP35790 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHKAP35790 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHKAP35790 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHKAP35790 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHKAP35790 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHKAP35790 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHKAP35790 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms