Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CKS2P33552 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CKS2P33552 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CKS2P33552 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.62□□□□□ -0.07
CKS2P33552 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.62□□□□□ -0.07
CKS2P33552 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
CKS2P33552 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.62□□□□□ -0.07
CKS2P33552 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CKS2P33552 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 UNC93B8-201ENST00000511903 705 ntBASIC14.62□□□□□ -0.07
CKS2P33552 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CKS2P33552 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.62□□□□□ -0.07
CKS2P33552 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.62□□□□□ -0.07
CKS2P33552 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.62□□□□□ -0.07
CKS2P33552 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CKS2P33552 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CKS2P33552 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CKS2P33552 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CKS2P33552 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CKS2P33552 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CKS2P33552 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CKS2P33552 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
CKS2P33552 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CKS2P33552 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.61□□□□□ -0.07
CKS2P33552 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CKS2P33552 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.61□□□□□ -0.07
CKS2P33552 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 AC005082.1-201ENST00000413042 2259 ntBASIC14.61□□□□□ -0.07
CKS2P33552 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CKS2P33552 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.61□□□□□ -0.07
CKS2P33552 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.61□□□□□ -0.07
CKS2P33552 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.61□□□□□ -0.07
CKS2P33552 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 AC136469.2-201ENST00000623944 1028 ntBASIC14.61□□□□□ -0.07
CKS2P33552 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.61□□□□□ -0.07
CKS2P33552 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CKS2P33552 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.61□□□□□ -0.07
CKS2P33552 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CKS2P33552 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.61□□□□□ -0.07
CKS2P33552 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKS2P33552 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.61□□□□□ -0.07
CKS2P33552 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CKS2P33552 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CKS2P33552 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKS2P33552 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CKS2P33552 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.6□□□□□ -0.07
CKS2P33552 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.6□□□□□ -0.07
CKS2P33552 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.6□□□□□ -0.07
CKS2P33552 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CKS2P33552 DPP3P2-201ENST00000416030 1696 ntBASIC14.6□□□□□ -0.07
CKS2P33552 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKS2P33552 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CKS2P33552 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.6□□□□□ -0.07
CKS2P33552 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CKS2P33552 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CKS2P33552 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKS2P33552 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKS2P33552 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CKS2P33552 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CKS2P33552 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.6□□□□□ -0.07
CKS2P33552 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CKS2P33552 AC061975.6-201ENST00000579045 1553 ntBASIC14.6□□□□□ -0.07
CKS2P33552 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CKS2P33552 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CKS2P33552 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.6□□□□□ -0.07
CKS2P33552 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKS2P33552 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CKS2P33552 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.59□□□□□ -0.07
CKS2P33552 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.59□□□□□ -0.07
CKS2P33552 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.59□□□□□ -0.07
CKS2P33552 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CKS2P33552 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms