Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN6P29350 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN6P29350 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN6P29350 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.87■□□□□ 0.61
PTPN6P29350 TSPY6P-201ENST00000448518 926 ntBASIC18.87■□□□□ 0.61
PTPN6P29350 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN6P29350 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN6P29350 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN6P29350 AC098818.2-201ENST00000564925 2320 ntBASIC18.87■□□□□ 0.61
PTPN6P29350 OR10C1-204ENST00000622521 1039 ntBASIC18.87■□□□□ 0.61
PTPN6P29350 AC008694.1-202ENST00000636953 945 ntBASIC18.87■□□□□ 0.61
PTPN6P29350 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN6P29350 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PTPN6P29350 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN6P29350 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN6P29350 AC009237.14-201ENST00000609975 1594 ntBASIC18.86■□□□□ 0.61
PTPN6P29350 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PTPN6P29350 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PTPN6P29350 GUSBP6-202ENST00000438529 1198 ntBASIC18.86■□□□□ 0.61
PTPN6P29350 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN6P29350 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 AC105036.2-201ENST00000569468 176 ntBASIC18.86■□□□□ 0.61
PTPN6P29350 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN6P29350 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN6P29350 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PTPN6P29350 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN6P29350 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN6P29350 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN6P29350 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN6P29350 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN6P29350 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PTPN6P29350 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PTPN6P29350 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN6P29350 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PTPN6P29350 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PTPN6P29350 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
PTPN6P29350 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN6P29350 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN6P29350 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN6P29350 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN6P29350 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN6P29350 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN6P29350 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN6P29350 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN6P29350 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN6P29350 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PTPN6P29350 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.84■□□□□ 0.61
PTPN6P29350 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN6P29350 RARRES2P4-201ENST00000514074 484 ntBASIC18.84■□□□□ 0.61
PTPN6P29350 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PTPN6P29350 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN6P29350 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN6P29350 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN6P29350 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN6P29350 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN6P29350 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
PTPN6P29350 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN6P29350 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN6P29350 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN6P29350 AL512625.2-201ENST00000417533 625 ntBASIC18.83■□□□□ 0.6
PTPN6P29350 AC093787.1-201ENST00000450396 207 ntBASIC18.83■□□□□ 0.6
PTPN6P29350 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.83■□□□□ 0.6
PTPN6P29350 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PTPN6P29350 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.83■□□□□ 0.6
PTPN6P29350 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PTPN6P29350 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.83■□□□□ 0.6
PTPN6P29350 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN6P29350 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN6P29350 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN6P29350 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN6P29350 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
PTPN6P29350 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN6P29350 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN6P29350 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.82■□□□□ 0.6
PTPN6P29350 RNF165-205ENST00000588679 2904 ntBASIC18.82■□□□□ 0.6
PTPN6P29350 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms