Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
BRD2P25440 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
BRD2P25440 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
BRD2P25440 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.33■■□□□ 1
BRD2P25440 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
BRD2P25440 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.32■■□□□ 1
BRD2P25440 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
BRD2P25440 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
BRD2P25440 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
BRD2P25440 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
BRD2P25440 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
BRD2P25440 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.32■■□□□ 1
BRD2P25440 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
BRD2P25440 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
BRD2P25440 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.32■■□□□ 1
BRD2P25440 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.32■■□□□ 1
BRD2P25440 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BRD2P25440 AC073210.2-201ENST00000430369 194 ntBASIC21.32■■□□□ 1
BRD2P25440 AL031963.3-201ENST00000606441 850 ntBASIC21.32■■□□□ 1
BRD2P25440 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BRD2P25440 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.32■■□□□ 1
BRD2P25440 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
BRD2P25440 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.31■■□□□ 1
BRD2P25440 KRT8P17-201ENST00000453110 1448 ntBASIC21.31■■□□□ 1
BRD2P25440 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.31■■□□□ 1
BRD2P25440 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
BRD2P25440 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.31■■□□□ 1
BRD2P25440 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
BRD2P25440 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BRD2P25440 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BRD2P25440 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BRD2P25440 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.31■■□□□ 1
BRD2P25440 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.31■■□□□ 1
BRD2P25440 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.31■■□□□ 1
BRD2P25440 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
BRD2P25440 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.31■■□□□ 1
BRD2P25440 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BRD2P25440 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BRD2P25440 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
BRD2P25440 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.31■■□□□ 1
BRD2P25440 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BRD2P25440 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BRD2P25440 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.31■■□□□ 1
BRD2P25440 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.31■■□□□ 1
BRD2P25440 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
BRD2P25440 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
BRD2P25440 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
BRD2P25440 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
BRD2P25440 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
BRD2P25440 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.3■■□□□ 1
BRD2P25440 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.3■■□□□ 1
BRD2P25440 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
BRD2P25440 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
BRD2P25440 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.3■■□□□ 1
BRD2P25440 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.3■■□□□ 1
BRD2P25440 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
BRD2P25440 KRT8P20-201ENST00000423953 1409 ntBASIC21.29■■□□□ 1
BRD2P25440 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.29■■□□□ 1
BRD2P25440 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRD2P25440 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.29■■□□□ 1
BRD2P25440 TCF3P1-201ENST00000423021 1937 ntBASIC21.29■■□□□ 1
BRD2P25440 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
BRD2P25440 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.29■■□□□ 1
BRD2P25440 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.29■■□□□ 1
BRD2P25440 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRD2P25440 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
BRD2P25440 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRD2P25440 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.29■■□□□ 1
BRD2P25440 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.29■■□□□ 1
BRD2P25440 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.29■■□□□ 1
BRD2P25440 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.29■■□□□ 1
BRD2P25440 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRD2P25440 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.29■■□□□ 1
BRD2P25440 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.29■■□□□ 1
BRD2P25440 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.29■■□□□ 1
BRD2P25440 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.29■■□□□ 1
BRD2P25440 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRD2P25440 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRD2P25440 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
BRD2P25440 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
BRD2P25440 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
BRD2P25440 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.29■■□□□ 1
BRD2P25440 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRD2P25440 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BRD2P25440 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.28■■□□□ 1
BRD2P25440 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
BRD2P25440 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRD2P25440 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms