Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
MMP8P22894 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP8P22894 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP8P22894 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP8P22894 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP8P22894 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
MMP8P22894 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP8P22894 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MMP8P22894 AC069152.1-201ENST00000438030 544 ntBASIC20.95■□□□□ 0.94
MMP8P22894 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP8P22894 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP8P22894 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP8P22894 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.95■□□□□ 0.94
MMP8P22894 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP8P22894 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP8P22894 HLA-B-256ENST00000639848 1089 ntBASIC20.95■□□□□ 0.94
MMP8P22894 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP8P22894 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MMP8P22894 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP8P22894 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MMP8P22894 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MMP8P22894 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP8P22894 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP8P22894 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.94■□□□□ 0.94
MMP8P22894 AC133041.1-202ENST00000642053 222 ntBASIC20.94■□□□□ 0.94
MMP8P22894 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.94■□□□□ 0.94
MMP8P22894 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP8P22894 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP8P22894 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP8P22894 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
MMP8P22894 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MMP8P22894 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.93■□□□□ 0.94
MMP8P22894 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MMP8P22894 AL158211.5-201ENST00000623583 2518 ntBASIC20.93■□□□□ 0.94
MMP8P22894 AL390719.1-204ENST00000412397 1219 ntBASIC20.93■□□□□ 0.94
MMP8P22894 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MMP8P22894 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MMP8P22894 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.93■□□□□ 0.94
MMP8P22894 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.93■□□□□ 0.94
MMP8P22894 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP8P22894 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP8P22894 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MMP8P22894 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP8P22894 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP8P22894 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP8P22894 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP8P22894 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP8P22894 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP8P22894 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.92■□□□□ 0.94
MMP8P22894 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.92■□□□□ 0.94
MMP8P22894 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP8P22894 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MMP8P22894 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP8P22894 TREX1-205ENST00000625293 1783 ntBASIC20.92■□□□□ 0.94
MMP8P22894 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
MMP8P22894 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP8P22894 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP8P22894 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP8P22894 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP8P22894 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MMP8P22894 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP8P22894 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP8P22894 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP8P22894 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.91■□□□□ 0.94
MMP8P22894 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.91■□□□□ 0.94
MMP8P22894 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP8P22894 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.91■□□□□ 0.94
MMP8P22894 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
MMP8P22894 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP8P22894 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
MMP8P22894 HLA-L-209ENST00000420110 1011 ntBASIC20.91■□□□□ 0.94
MMP8P22894 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.91■□□□□ 0.94
MMP8P22894 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.91■□□□□ 0.94
MMP8P22894 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP8P22894 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms