Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
MSR1P21757 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.57■□□□□ 0.4
MSR1P21757 AC092118.2-201ENST00000613495 667 ntBASIC17.57■□□□□ 0.4
MSR1P21757 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.57■□□□□ 0.4
MSR1P21757 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.57■□□□□ 0.4
MSR1P21757 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
MSR1P21757 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
MSR1P21757 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MSR1P21757 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.57■□□□□ 0.4
MSR1P21757 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
MSR1P21757 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.56■□□□□ 0.4
MSR1P21757 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
MSR1P21757 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 TSPY6P-201ENST00000448518 926 ntBASIC17.56■□□□□ 0.4
MSR1P21757 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.56■□□□□ 0.4
MSR1P21757 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.56■□□□□ 0.4
MSR1P21757 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
MSR1P21757 TMEM179-206ENST00000616017 1645 ntBASIC17.56■□□□□ 0.4
MSR1P21757 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.56■□□□□ 0.4
MSR1P21757 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSR1P21757 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.56■□□□□ 0.4
MSR1P21757 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.55■□□□□ 0.4
MSR1P21757 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MSR1P21757 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.55■□□□□ 0.4
MSR1P21757 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 AFG3L1P-217ENST00000557444 2447 ntBASIC17.55■□□□□ 0.4
MSR1P21757 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.55■□□□□ 0.4
MSR1P21757 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MSR1P21757 GUSBP6-202ENST00000438529 1198 ntBASIC17.55■□□□□ 0.4
MSR1P21757 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MSR1P21757 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.55■□□□□ 0.4
MSR1P21757 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.55■□□□□ 0.4
MSR1P21757 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.55■□□□□ 0.4
MSR1P21757 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.55■□□□□ 0.4
MSR1P21757 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSR1P21757 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.54■□□□□ 0.4
MSR1P21757 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
MSR1P21757 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.54■□□□□ 0.4
MSR1P21757 DUSP5P2-201ENST00000426873 1033 ntBASIC17.54■□□□□ 0.4
MSR1P21757 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.54■□□□□ 0.4
MSR1P21757 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.54■□□□□ 0.4
MSR1P21757 MIR4758-201ENST00000577688 71 ntBASIC17.54■□□□□ 0.4
MSR1P21757 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.54■□□□□ 0.4
MSR1P21757 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.54■□□□□ 0.4
MSR1P21757 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.54■□□□□ 0.4
MSR1P21757 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.54■□□□□ 0.4
MSR1P21757 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.54■□□□□ 0.4
MSR1P21757 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSR1P21757 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MSR1P21757 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms