Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.04■■□□□ 1.28
ERCC3P19447 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.04■■□□□ 1.28
ERCC3P19447 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.04■■□□□ 1.28
ERCC3P19447 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.04■■□□□ 1.28
ERCC3P19447 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.04■■□□□ 1.28
ERCC3P19447 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
ERCC3P19447 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.04■■□□□ 1.28
ERCC3P19447 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ERCC3P19447 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.04■■□□□ 1.28
ERCC3P19447 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.04■■□□□ 1.28
ERCC3P19447 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.04■■□□□ 1.28
ERCC3P19447 CD177P1-201ENST00000606252 935 ntBASIC23.04■■□□□ 1.28
ERCC3P19447 AL353708.3-201ENST00000610272 989 ntBASIC23.04■■□□□ 1.28
ERCC3P19447 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ERCC3P19447 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ERCC3P19447 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ERCC3P19447 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ERCC3P19447 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.04■■□□□ 1.28
ERCC3P19447 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ERCC3P19447 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.04■■□□□ 1.28
ERCC3P19447 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ERCC3P19447 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ERCC3P19447 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ERCC3P19447 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.03■■□□□ 1.28
ERCC3P19447 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.03■■□□□ 1.28
ERCC3P19447 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ERCC3P19447 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ERCC3P19447 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ERCC3P19447 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
ERCC3P19447 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ERCC3P19447 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ERCC3P19447 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.03■■□□□ 1.28
ERCC3P19447 AL355355.2-201ENST00000442321 338 ntBASIC23.03■■□□□ 1.28
ERCC3P19447 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ERCC3P19447 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ERCC3P19447 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ERCC3P19447 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.03■■□□□ 1.28
ERCC3P19447 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.03■■□□□ 1.28
ERCC3P19447 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.03■■□□□ 1.28
ERCC3P19447 AL121906.2-201ENST00000621597 723 ntBASIC23.03■■□□□ 1.28
ERCC3P19447 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ERCC3P19447 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
ERCC3P19447 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.03■■□□□ 1.28
ERCC3P19447 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ERCC3P19447 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ERCC3P19447 AC121338.2-201ENST00000622535 1744 ntBASIC23.02■■□□□ 1.28
ERCC3P19447 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ERCC3P19447 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.02■■□□□ 1.28
ERCC3P19447 FAM197Y1-201ENST00000421178 764 ntBASIC23.02■■□□□ 1.28
ERCC3P19447 AL353807.1-201ENST00000427475 662 ntBASIC23.02■■□□□ 1.28
ERCC3P19447 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.02■■□□□ 1.28
ERCC3P19447 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.02■■□□□ 1.28
ERCC3P19447 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.02■■□□□ 1.28
ERCC3P19447 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ERCC3P19447 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ERCC3P19447 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
ERCC3P19447 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ERCC3P19447 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ERCC3P19447 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.02■■□□□ 1.28
ERCC3P19447 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.02■■□□□ 1.28
ERCC3P19447 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
ERCC3P19447 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 AL049796.1-201ENST00000565336 1766 ntBASIC23.01■■□□□ 1.27
ERCC3P19447 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
ERCC3P19447 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.01■■□□□ 1.27
ERCC3P19447 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
ERCC3P19447 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.01■■□□□ 1.27
ERCC3P19447 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.01■■□□□ 1.27
ERCC3P19447 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ERCC3P19447 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.01■■□□□ 1.27
ERCC3P19447 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.01■■□□□ 1.27
ERCC3P19447 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ERCC3P19447 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ERCC3P19447 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23■■□□□ 1.27
ERCC3P19447 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ERCC3P19447 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ERCC3P19447 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23■■□□□ 1.27
ERCC3P19447 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23■■□□□ 1.27
ERCC3P19447 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
ERCC3P19447 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ERCC3P19447 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23■■□□□ 1.27
ERCC3P19447 RCN1P1-201ENST00000400413 996 ntBASIC23■■□□□ 1.27
ERCC3P19447 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23■■□□□ 1.27
ERCC3P19447 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23■■□□□ 1.27
ERCC3P19447 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23■■□□□ 1.27
ERCC3P19447 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
ERCC3P19447 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
ERCC3P19447 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23■■□□□ 1.27
ERCC3P19447 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
ERCC3P19447 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms