Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
XRCC1P18887 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
XRCC1P18887 ESRRAP1-201ENST00000400596 1257 ntBASIC19.81■□□□□ 0.76
XRCC1P18887 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
XRCC1P18887 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.81■□□□□ 0.76
XRCC1P18887 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.81■□□□□ 0.76
XRCC1P18887 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.81■□□□□ 0.76
XRCC1P18887 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
XRCC1P18887 ITM2C-210ENST00000620962 501 ntBASIC19.81■□□□□ 0.76
XRCC1P18887 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.81■□□□□ 0.76
XRCC1P18887 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.81■□□□□ 0.76
XRCC1P18887 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.81■□□□□ 0.76
XRCC1P18887 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC1P18887 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
XRCC1P18887 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.8■□□□□ 0.76
XRCC1P18887 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.8■□□□□ 0.76
XRCC1P18887 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.8■□□□□ 0.76
XRCC1P18887 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.8■□□□□ 0.76
XRCC1P18887 AC026366.1-201ENST00000488803 879 ntBASIC19.8■□□□□ 0.76
XRCC1P18887 PNMA6B-201ENST00000538162 1200 ntBASIC19.8■□□□□ 0.76
XRCC1P18887 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.8■□□□□ 0.76
XRCC1P18887 MIR2861-201ENST00000636310 90 ntBASIC19.8■□□□□ 0.76
XRCC1P18887 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC1P18887 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 AC092368.3-202ENST00000574180 1591 ntBASIC19.79■□□□□ 0.76
XRCC1P18887 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.79■□□□□ 0.76
XRCC1P18887 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.79■□□□□ 0.76
XRCC1P18887 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
XRCC1P18887 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.79■□□□□ 0.76
XRCC1P18887 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
XRCC1P18887 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
XRCC1P18887 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC1P18887 SMG8-203ENST00000578922 2178 ntBASIC19.78■□□□□ 0.76
XRCC1P18887 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC1P18887 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC1P18887 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC1P18887 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
XRCC1P18887 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
XRCC1P18887 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
XRCC1P18887 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC1P18887 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC1P18887 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.78■□□□□ 0.76
XRCC1P18887 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC1P18887 AP003097.1-201ENST00000530657 1135 ntBASIC19.78■□□□□ 0.76
XRCC1P18887 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.78■□□□□ 0.76
XRCC1P18887 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
XRCC1P18887 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
XRCC1P18887 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.78■□□□□ 0.76
XRCC1P18887 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
XRCC1P18887 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC1P18887 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
XRCC1P18887 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
XRCC1P18887 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.77■□□□□ 0.76
XRCC1P18887 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC1P18887 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC1P18887 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC1P18887 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC1P18887 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC1P18887 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC1P18887 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC1P18887 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC1P18887 KRT18P29-201ENST00000397031 1267 ntBASIC19.77■□□□□ 0.76
XRCC1P18887 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC1P18887 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.77■□□□□ 0.75
XRCC1P18887 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
XRCC1P18887 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
XRCC1P18887 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms