Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.5■□□□□ 0.87
ERCC2P18074 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
ERCC2P18074 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.5■□□□□ 0.87
ERCC2P18074 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.5■□□□□ 0.87
ERCC2P18074 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ERCC2P18074 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.5■□□□□ 0.87
ERCC2P18074 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.5■□□□□ 0.87
ERCC2P18074 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.5■□□□□ 0.87
ERCC2P18074 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.5■□□□□ 0.87
ERCC2P18074 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.5■□□□□ 0.87
ERCC2P18074 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.5■□□□□ 0.87
ERCC2P18074 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC2P18074 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.5■□□□□ 0.87
ERCC2P18074 AFG3L1P-217ENST00000557444 2447 ntBASIC20.5■□□□□ 0.87
ERCC2P18074 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.5■□□□□ 0.87
ERCC2P18074 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ERCC2P18074 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC2P18074 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ERCC2P18074 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC2P18074 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.49■□□□□ 0.87
ERCC2P18074 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.49■□□□□ 0.87
ERCC2P18074 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ERCC2P18074 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC2P18074 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.49■□□□□ 0.87
ERCC2P18074 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
ERCC2P18074 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
ERCC2P18074 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC2P18074 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC2P18074 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC2P18074 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.49■□□□□ 0.87
ERCC2P18074 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.49■□□□□ 0.87
ERCC2P18074 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ERCC2P18074 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC2P18074 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC2P18074 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.48■□□□□ 0.87
ERCC2P18074 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC2P18074 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ERCC2P18074 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.48■□□□□ 0.87
ERCC2P18074 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC2P18074 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.48■□□□□ 0.87
ERCC2P18074 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.48■□□□□ 0.87
ERCC2P18074 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC2P18074 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.48■□□□□ 0.87
ERCC2P18074 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC2P18074 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC2P18074 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC2P18074 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC2P18074 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.47■□□□□ 0.87
ERCC2P18074 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC2P18074 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.47■□□□□ 0.87
ERCC2P18074 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.47■□□□□ 0.87
ERCC2P18074 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ERCC2P18074 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.47■□□□□ 0.87
ERCC2P18074 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC2P18074 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC2P18074 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC2P18074 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
ERCC2P18074 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ERCC2P18074 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.46■□□□□ 0.87
ERCC2P18074 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.46■□□□□ 0.87
ERCC2P18074 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ERCC2P18074 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ERCC2P18074 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ERCC2P18074 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ERCC2P18074 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.46■□□□□ 0.87
ERCC2P18074 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.46■□□□□ 0.87
ERCC2P18074 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ERCC2P18074 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.46■□□□□ 0.87
ERCC2P18074 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.46■□□□□ 0.87
ERCC2P18074 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.46■□□□□ 0.87
ERCC2P18074 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ERCC2P18074 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.46■□□□□ 0.87
ERCC2P18074 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.46■□□□□ 0.87
ERCC2P18074 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.46■□□□□ 0.87
ERCC2P18074 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ERCC2P18074 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.46■□□□□ 0.87
ERCC2P18074 TMEM179-206ENST00000616017 1645 ntBASIC20.45■□□□□ 0.87
ERCC2P18074 PHGDH-210ENST00000641115 1638 ntBASIC20.45■□□□□ 0.87
ERCC2P18074 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.45■□□□□ 0.86
ERCC2P18074 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ERCC2P18074 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ERCC2P18074 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ERCC2P18074 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.45■□□□□ 0.86
ERCC2P18074 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ERCC2P18074 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.45■□□□□ 0.86
ERCC2P18074 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.45■□□□□ 0.86
ERCC2P18074 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ERCC2P18074 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ERCC2P18074 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ERCC2P18074 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ERCC2P18074 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ERCC2P18074 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.44■□□□□ 0.86
ERCC2P18074 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC2P18074 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.44■□□□□ 0.86
ERCC2P18074 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.44■□□□□ 0.86
ERCC2P18074 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC2P18074 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.44■□□□□ 0.86
ERCC2P18074 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC2P18074 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC2P18074 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms