Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CFTRP13569 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC34.36■■■■□ 3.09
CFTRP13569 AL450487.1-201ENST00000426799 995 ntBASIC34.36■■■■□ 3.09
CFTRP13569 PTPA-216ENST00000432651 857 ntTSL 2 BASIC34.36■■■■□ 3.09
CFTRP13569 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC34.36■■■■□ 3.09
CFTRP13569 AC116407.4-201ENST00000623319 1061 ntBASIC34.36■■■■□ 3.09
CFTRP13569 AC116562.4-202ENST00000641738 218 ntBASIC34.36■■■■□ 3.09
CFTRP13569 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
CFTRP13569 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC34.36■■■■□ 3.09
CFTRP13569 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
CFTRP13569 KRT8P17-201ENST00000453110 1448 ntBASIC34.36■■■■□ 3.09
CFTRP13569 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC34.35■■■■□ 3.09
CFTRP13569 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC34.35■■■■□ 3.09
CFTRP13569 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC34.35■■■■□ 3.09
CFTRP13569 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC34.35■■■■□ 3.09
CFTRP13569 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC34.35■■■■□ 3.09
CFTRP13569 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC34.35■■■■□ 3.09
CFTRP13569 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC34.35■■■■□ 3.09
CFTRP13569 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC34.35■■■■□ 3.09
CFTRP13569 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
CFTRP13569 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC34.35■■■■□ 3.09
CFTRP13569 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
CFTRP13569 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC34.35■■■■□ 3.09
CFTRP13569 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC34.34■■■■□ 3.09
CFTRP13569 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC34.34■■■■□ 3.09
CFTRP13569 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
CFTRP13569 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC34.34■■■■□ 3.09
CFTRP13569 GPX4-207ENST00000589115 812 ntTSL 2 BASIC34.34■■■■□ 3.09
CFTRP13569 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC34.34■■■■□ 3.09
CFTRP13569 AC011298.2-201ENST00000617989 482 ntBASIC34.34■■■■□ 3.09
CFTRP13569 AC141257.4-201ENST00000634557 245 ntBASIC34.34■■■■□ 3.09
CFTRP13569 AC136944.6-201ENST00000634818 245 ntBASIC34.34■■■■□ 3.09
CFTRP13569 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC34.34■■■■□ 3.09
CFTRP13569 IER3-202ENST00000376377 1350 ntBASIC34.34■■■■□ 3.09
CFTRP13569 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CFTRP13569 CD320-202ENST00000537716 1119 ntTSL 2 BASIC34.33■■■■□ 3.09
CFTRP13569 AL023803.3-201ENST00000615559 522 ntBASIC34.33■■■■□ 3.09
CFTRP13569 HLA-A-209ENST00000638375 975 ntBASIC34.33■■■■□ 3.09
CFTRP13569 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC34.33■■■■□ 3.09
CFTRP13569 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC34.33■■■■□ 3.09
CFTRP13569 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CFTRP13569 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CFTRP13569 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC34.33■■■■□ 3.09
CFTRP13569 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC34.33■■■■□ 3.09
CFTRP13569 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC34.33■■■■□ 3.09
CFTRP13569 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC34.33■■■■□ 3.09
CFTRP13569 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC34.33■■■■□ 3.09
CFTRP13569 AC008622.2-201ENST00000617006 1229 ntBASIC34.33■■■■□ 3.09
CFTRP13569 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
CFTRP13569 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC34.32■■■■□ 3.09
CFTRP13569 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
CFTRP13569 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.09
CFTRP13569 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CFTRP13569 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC34.32■■■■□ 3.08
CFTRP13569 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CFTRP13569 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CFTRP13569 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CFTRP13569 TERT-206ENST00000508104 2486 ntTSL 5 BASIC34.32■■■■□ 3.08
CFTRP13569 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CFTRP13569 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CFTRP13569 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
CFTRP13569 CCR12P-201ENST00000446203 998 ntBASIC34.32■■■■□ 3.08
CFTRP13569 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC34.32■■■■□ 3.08
CFTRP13569 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC34.32■■■■□ 3.08
CFTRP13569 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CFTRP13569 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC34.32■■■■□ 3.08
CFTRP13569 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.08
CFTRP13569 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
CFTRP13569 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
CFTRP13569 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC34.31■■■■□ 3.08
CFTRP13569 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CFTRP13569 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
CFTRP13569 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC34.31■■■■□ 3.08
CFTRP13569 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC34.31■■■■□ 3.08
CFTRP13569 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC34.31■■■■□ 3.08
CFTRP13569 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC34.31■■■■□ 3.08
CFTRP13569 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
CFTRP13569 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC34.31■■■■□ 3.08
CFTRP13569 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CFTRP13569 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC34.3■■■■□ 3.08
CFTRP13569 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
CFTRP13569 AC005332.1-201ENST00000577698 1310 ntBASIC34.3■■■■□ 3.08
CFTRP13569 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
CFTRP13569 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CFTRP13569 AC092647.4-201ENST00000457211 535 ntBASIC34.3■■■■□ 3.08
CFTRP13569 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC34.3■■■■□ 3.08
CFTRP13569 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CFTRP13569 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC34.3■■■■□ 3.08
CFTRP13569 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC34.3■■■■□ 3.08
CFTRP13569 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
CFTRP13569 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
CFTRP13569 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC34.3■■■■□ 3.08
CFTRP13569 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CFTRP13569 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CFTRP13569 ANKRD20A18P-201ENST00000359341 492 ntBASIC34.29■■■■□ 3.08
CFTRP13569 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC34.29■■■■□ 3.08
CFTRP13569 IPPK-202ENST00000375522 882 ntTSL 3 BASIC34.29■■■■□ 3.08
CFTRP13569 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC34.29■■■■□ 3.08
CFTRP13569 AC026396.1-201ENST00000419388 421 ntBASIC34.29■■■■□ 3.08
CFTRP13569 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC34.29■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms