Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
UBCP0CG48 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
UBCP0CG48 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.41■□□□□ 0.38
UBCP0CG48 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.41■□□□□ 0.38
UBCP0CG48 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.41■□□□□ 0.38
UBCP0CG48 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.41■□□□□ 0.38
UBCP0CG48 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UBCP0CG48 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.4■□□□□ 0.38
UBCP0CG48 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.4■□□□□ 0.38
UBCP0CG48 NTF6G-201ENST00000591094 616 ntBASIC17.4■□□□□ 0.38
UBCP0CG48 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UBCP0CG48 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UBCP0CG48 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.4■□□□□ 0.38
UBCP0CG48 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UBCP0CG48 AC009237.14-201ENST00000609975 1594 ntBASIC17.4■□□□□ 0.38
UBCP0CG48 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBCP0CG48 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UBCP0CG48 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
UBCP0CG48 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 TREX1-205ENST00000625293 1783 ntBASIC17.39■□□□□ 0.37
UBCP0CG48 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.39■□□□□ 0.37
UBCP0CG48 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UBCP0CG48 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.39■□□□□ 0.37
UBCP0CG48 AC100791.3-201ENST00000617619 330 ntBASIC17.39■□□□□ 0.37
UBCP0CG48 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
UBCP0CG48 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UBCP0CG48 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.39■□□□□ 0.37
UBCP0CG48 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UBCP0CG48 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
UBCP0CG48 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
UBCP0CG48 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBCP0CG48 KRT16P6-202ENST00000425692 1426 ntBASIC17.38■□□□□ 0.37
UBCP0CG48 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.38■□□□□ 0.37
UBCP0CG48 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.38■□□□□ 0.37
UBCP0CG48 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
UBCP0CG48 MCRIP2P1-201ENST00000394346 511 ntBASIC17.38■□□□□ 0.37
UBCP0CG48 AC034268.1-201ENST00000441047 882 ntBASIC17.38■□□□□ 0.37
UBCP0CG48 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.38■□□□□ 0.37
UBCP0CG48 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.38■□□□□ 0.37
UBCP0CG48 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.38■□□□□ 0.37
UBCP0CG48 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UBCP0CG48 AC016405.3-201ENST00000607710 860 ntBASIC17.38■□□□□ 0.37
UBCP0CG48 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
UBCP0CG48 PTBP1P-201ENST00000554374 1601 ntBASIC17.38■□□□□ 0.37
UBCP0CG48 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms