Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.44■■□□□ 1.66
SNRPA1P09661 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC25.44■■□□□ 1.66
SNRPA1P09661 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.44■■□□□ 1.66
SNRPA1P09661 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.44■■□□□ 1.66
SNRPA1P09661 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC25.44■■□□□ 1.66
SNRPA1P09661 C1QL1P1-201ENST00000568105 661 ntBASIC25.44■■□□□ 1.66
SNRPA1P09661 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.44■■□□□ 1.66
SNRPA1P09661 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.44■■□□□ 1.66
SNRPA1P09661 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 KRT16P1-201ENST00000399124 1418 ntBASIC25.44■■□□□ 1.66
SNRPA1P09661 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNRPA1P09661 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNRPA1P09661 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNRPA1P09661 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNRPA1P09661 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.43■■□□□ 1.66
SNRPA1P09661 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
SNRPA1P09661 UNC93B2-201ENST00000285383 730 ntBASIC25.43■■□□□ 1.66
SNRPA1P09661 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.43■■□□□ 1.66
SNRPA1P09661 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.43■■□□□ 1.66
SNRPA1P09661 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.43■■□□□ 1.66
SNRPA1P09661 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.43■■□□□ 1.66
SNRPA1P09661 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNRPA1P09661 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.43■■□□□ 1.66
SNRPA1P09661 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNRPA1P09661 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNRPA1P09661 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SNRPA1P09661 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNRPA1P09661 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNRPA1P09661 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.42■■□□□ 1.66
SNRPA1P09661 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.42■■□□□ 1.66
SNRPA1P09661 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNRPA1P09661 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SNRPA1P09661 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.42■■□□□ 1.66
SNRPA1P09661 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SNRPA1P09661 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.42■■□□□ 1.66
SNRPA1P09661 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.41■■□□□ 1.66
SNRPA1P09661 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25.41■■□□□ 1.66
SNRPA1P09661 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
SNRPA1P09661 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.41■■□□□ 1.66
SNRPA1P09661 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.41■■□□□ 1.66
SNRPA1P09661 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
SNRPA1P09661 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 MIR1224-201ENST00000408193 85 ntBASIC25.41■■□□□ 1.66
SNRPA1P09661 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.41■■□□□ 1.66
SNRPA1P09661 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
SNRPA1P09661 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.41■■□□□ 1.66
SNRPA1P09661 YBX1P10-201ENST00000444752 975 ntBASIC25.41■■□□□ 1.66
SNRPA1P09661 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.41■■□□□ 1.66
SNRPA1P09661 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 AP000525.1-201ENST00000608286 694 ntBASIC25.41■■□□□ 1.66
SNRPA1P09661 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.41■■□□□ 1.66
SNRPA1P09661 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNRPA1P09661 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SNRPA1P09661 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SNRPA1P09661 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
SNRPA1P09661 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.4■■□□□ 1.66
SNRPA1P09661 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.4■■□□□ 1.66
SNRPA1P09661 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.4■■□□□ 1.66
SNRPA1P09661 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.4■■□□□ 1.66
SNRPA1P09661 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SNRPA1P09661 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SNRPA1P09661 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
SNRPA1P09661 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.4■■□□□ 1.66
SNRPA1P09661 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SNRPA1P09661 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
SNRPA1P09661 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.4■■□□□ 1.66
SNRPA1P09661 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SNRPA1P09661 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SNRPA1P09661 SMG8-203ENST00000578922 2178 ntBASIC25.39■■□□□ 1.66
SNRPA1P09661 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SNRPA1P09661 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SNRPA1P09661 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.39■■□□□ 1.66
SNRPA1P09661 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
SNRPA1P09661 KRT8P9-201ENST00000558927 1449 ntBASIC25.39■■□□□ 1.66
SNRPA1P09661 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SNRPA1P09661 PHGDH-210ENST00000641115 1638 ntBASIC25.39■■□□□ 1.66
SNRPA1P09661 KRT18P16-201ENST00000510337 1294 ntBASIC25.39■■□□□ 1.66
SNRPA1P09661 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.39■■□□□ 1.66
SNRPA1P09661 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.39■■□□□ 1.66
SNRPA1P09661 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SNRPA1P09661 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SNRPA1P09661 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SNRPA1P09661 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms