Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CD48P09326 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.63■□□□□ 0.89
CD48P09326 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.63■□□□□ 0.89
CD48P09326 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.63■□□□□ 0.89
CD48P09326 AC092118.2-201ENST00000613495 667 ntBASIC20.63■□□□□ 0.89
CD48P09326 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD48P09326 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.63■□□□□ 0.89
CD48P09326 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.63■□□□□ 0.89
CD48P09326 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.62■□□□□ 0.89
CD48P09326 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD48P09326 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD48P09326 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD48P09326 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD48P09326 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD48P09326 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CD48P09326 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD48P09326 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.62■□□□□ 0.89
CD48P09326 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD48P09326 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.62■□□□□ 0.89
CD48P09326 AC090192.1-201ENST00000517740 490 ntBASIC20.62■□□□□ 0.89
CD48P09326 AL138781.1-201ENST00000566567 1274 ntBASIC20.62■□□□□ 0.89
CD48P09326 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.62■□□□□ 0.89
CD48P09326 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CD48P09326 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.62■□□□□ 0.89
CD48P09326 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD48P09326 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD48P09326 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.62■□□□□ 0.89
CD48P09326 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.61■□□□□ 0.89
CD48P09326 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.61■□□□□ 0.89
CD48P09326 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.61■□□□□ 0.89
CD48P09326 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 SLC29A4P1-201ENST00000398760 971 ntBASIC20.61■□□□□ 0.89
CD48P09326 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.61■□□□□ 0.89
CD48P09326 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CD48P09326 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.61■□□□□ 0.89
CD48P09326 AC091874.3-201ENST00000512672 1195 ntBASIC20.61■□□□□ 0.89
CD48P09326 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.61■□□□□ 0.89
CD48P09326 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CD48P09326 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD48P09326 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CD48P09326 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.6■□□□□ 0.89
CD48P09326 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
CD48P09326 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.6■□□□□ 0.89
CD48P09326 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.6■□□□□ 0.89
CD48P09326 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.6■□□□□ 0.89
CD48P09326 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 TREX1-205ENST00000625293 1783 ntBASIC20.6■□□□□ 0.89
CD48P09326 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.6■□□□□ 0.89
CD48P09326 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.6■□□□□ 0.89
CD48P09326 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.6■□□□□ 0.89
CD48P09326 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.6■□□□□ 0.89
CD48P09326 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.6■□□□□ 0.89
CD48P09326 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD48P09326 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
CD48P09326 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.59■□□□□ 0.89
CD48P09326 AC009237.14-201ENST00000609975 1594 ntBASIC20.59■□□□□ 0.89
CD48P09326 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.59■□□□□ 0.89
CD48P09326 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.59■□□□□ 0.89
CD48P09326 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.59■□□□□ 0.89
CD48P09326 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CD48P09326 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CD48P09326 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CD48P09326 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CD48P09326 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.59■□□□□ 0.89
CD48P09326 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.59■□□□□ 0.89
CD48P09326 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.59■□□□□ 0.89
CD48P09326 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CD48P09326 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD48P09326 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms