Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THBS1P07996 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
THBS1P07996 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
THBS1P07996 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
THBS1P07996 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 TREX1-205ENST00000625293 1783 ntBASIC18.3■□□□□ 0.52
THBS1P07996 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
THBS1P07996 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
THBS1P07996 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
THBS1P07996 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.3■□□□□ 0.52
THBS1P07996 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.3■□□□□ 0.52
THBS1P07996 AC006970.2-201ENST00000450065 779 ntBASIC18.3■□□□□ 0.52
THBS1P07996 AC105036.2-201ENST00000569468 176 ntBASIC18.3■□□□□ 0.52
THBS1P07996 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.3■□□□□ 0.52
THBS1P07996 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.3■□□□□ 0.52
THBS1P07996 AL158211.5-201ENST00000623583 2518 ntBASIC18.3■□□□□ 0.52
THBS1P07996 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
THBS1P07996 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.3■□□□□ 0.52
THBS1P07996 PHGDH-210ENST00000641115 1638 ntBASIC18.3■□□□□ 0.52
THBS1P07996 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
THBS1P07996 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
THBS1P07996 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
THBS1P07996 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
THBS1P07996 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.29■□□□□ 0.52
THBS1P07996 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.29■□□□□ 0.52
THBS1P07996 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
THBS1P07996 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
THBS1P07996 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.29■□□□□ 0.52
THBS1P07996 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.29■□□□□ 0.52
THBS1P07996 MIR663A-201ENST00000385250 93 ntBASIC18.29■□□□□ 0.52
THBS1P07996 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.29■□□□□ 0.52
THBS1P07996 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.29■□□□□ 0.52
THBS1P07996 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
THBS1P07996 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
THBS1P07996 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.29■□□□□ 0.52
THBS1P07996 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
THBS1P07996 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
THBS1P07996 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
THBS1P07996 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
THBS1P07996 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
THBS1P07996 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
THBS1P07996 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.28■□□□□ 0.52
THBS1P07996 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
THBS1P07996 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
THBS1P07996 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
THBS1P07996 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 GPX1P1-201ENST00000388829 606 ntBASIC18.28■□□□□ 0.52
THBS1P07996 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
THBS1P07996 AL109923.1-201ENST00000618799 583 ntBASIC18.28■□□□□ 0.52
THBS1P07996 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
THBS1P07996 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
THBS1P07996 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
THBS1P07996 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.27■□□□□ 0.52
THBS1P07996 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.27■□□□□ 0.52
THBS1P07996 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
THBS1P07996 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
THBS1P07996 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.27■□□□□ 0.52
THBS1P07996 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.27■□□□□ 0.52
THBS1P07996 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.27■□□□□ 0.52
THBS1P07996 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THBS1P07996 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
THBS1P07996 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.27■□□□□ 0.52
THBS1P07996 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.27■□□□□ 0.52
THBS1P07996 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.27■□□□□ 0.52
THBS1P07996 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.27■□□□□ 0.52
THBS1P07996 AC142086.2-201ENST00000569753 217 ntBASIC18.27■□□□□ 0.52
THBS1P07996 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
THBS1P07996 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
THBS1P07996 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.27■□□□□ 0.52
THBS1P07996 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.27■□□□□ 0.52
THBS1P07996 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
THBS1P07996 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THBS1P07996 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
THBS1P07996 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
THBS1P07996 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.27■□□□□ 0.51
THBS1P07996 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.26■□□□□ 0.51
THBS1P07996 AC007952.6-201ENST00000573168 2673 ntBASIC18.26■□□□□ 0.51
THBS1P07996 AC003957.1-201ENST00000625108 2673 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms