Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRAP04437 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.13■□□□□ 0.01
TCRAP04437 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TCRAP04437 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRAP04437 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.12■□□□□ 0.01
TCRAP04437 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.12■□□□□ 0.01
TCRAP04437 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TCRAP04437 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TCRAP04437 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.12■□□□□ 0.01
TCRAP04437 IRS3P-201ENST00000223076 1006 ntBASIC15.12■□□□□ 0.01
TCRAP04437 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.12■□□□□ 0.01
TCRAP04437 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TCRAP04437 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.12■□□□□ 0.01
TCRAP04437 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.12■□□□□ 0.01
TCRAP04437 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.12■□□□□ 0.01
TCRAP04437 CCDC92B-201ENST00000575506 885 ntBASIC15.12■□□□□ 0.01
TCRAP04437 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.12■□□□□ 0.01
TCRAP04437 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.12■□□□□ 0.01
TCRAP04437 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.12■□□□□ 0.01
TCRAP04437 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRAP04437 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TCRAP04437 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TCRAP04437 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TCRAP04437 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 PGM5P4-201ENST00000421970 445 ntBASIC15.11■□□□□ 0.01
TCRAP04437 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 AP001160.3-201ENST00000601484 763 ntBASIC15.11■□□□□ 0.01
TCRAP04437 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.11■□□□□ 0.01
TCRAP04437 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
TCRAP04437 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TCRAP04437 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TCRAP04437 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
TCRAP04437 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TCRAP04437 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRAP04437 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TCRAP04437 RBM17P2-201ENST00000616397 1405 ntBASIC15.1■□□□□ 0.01
TCRAP04437 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRAP04437 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRAP04437 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRAP04437 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TCRAP04437 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRAP04437 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.1■□□□□ 0.01
TCRAP04437 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRAP04437 KRT18P20-201ENST00000548986 1279 ntBASIC15.1■□□□□ 0.01
TCRAP04437 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRAP04437 AC104187.1-201ENST00000607510 612 ntBASIC15.1■□□□□ 0.01
TCRAP04437 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRAP04437 MIR6084-201ENST00000622012 110 ntBASIC15.1■□□□□ 0.01
TCRAP04437 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms