Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.54■■□□□ 1.2
HMGCRP04035 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.54■■□□□ 1.2
HMGCRP04035 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 AC128688.1-201ENST00000487626 519 ntBASIC22.54■■□□□ 1.2
HMGCRP04035 AC063952.2-201ENST00000498792 1227 ntBASIC22.54■■□□□ 1.2
HMGCRP04035 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.54■■□□□ 1.2
HMGCRP04035 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 AL445675.2-201ENST00000620291 557 ntBASIC22.54■■□□□ 1.2
HMGCRP04035 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
HMGCRP04035 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.54■■□□□ 1.2
HMGCRP04035 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.54■■□□□ 1.2
HMGCRP04035 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.54■■□□□ 1.2
HMGCRP04035 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCRP04035 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.53■■□□□ 1.2
HMGCRP04035 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.53■■□□□ 1.2
HMGCRP04035 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.53■■□□□ 1.2
HMGCRP04035 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.53■■□□□ 1.2
HMGCRP04035 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.53■■□□□ 1.2
HMGCRP04035 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 C1QL1P1-201ENST00000568105 661 ntBASIC22.53■■□□□ 1.2
HMGCRP04035 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.53■■□□□ 1.2
HMGCRP04035 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCRP04035 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCRP04035 AC244015.2-201ENST00000616358 1861 ntBASIC22.52■■□□□ 1.2
HMGCRP04035 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCRP04035 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCRP04035 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCRP04035 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCRP04035 B3GAT3P1-201ENST00000471720 806 ntBASIC22.52■■□□□ 1.2
HMGCRP04035 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCRP04035 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
HMGCRP04035 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.52■■□□□ 1.2
HMGCRP04035 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.52■■□□□ 1.2
HMGCRP04035 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.52■■□□□ 1.2
HMGCRP04035 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.52■■□□□ 1.2
HMGCRP04035 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.52■■□□□ 1.2
HMGCRP04035 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCRP04035 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCRP04035 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCRP04035 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
HMGCRP04035 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCRP04035 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
HMGCRP04035 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
HMGCRP04035 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.51■■□□□ 1.19
HMGCRP04035 PTBP1P-201ENST00000554374 1601 ntBASIC22.51■■□□□ 1.19
HMGCRP04035 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCRP04035 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.51■■□□□ 1.19
HMGCRP04035 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.51■■□□□ 1.19
HMGCRP04035 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
HMGCRP04035 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.51■■□□□ 1.19
HMGCRP04035 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.51■■□□□ 1.19
HMGCRP04035 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.51■■□□□ 1.19
HMGCRP04035 FAM87A-204ENST00000613235 858 ntBASIC22.51■■□□□ 1.19
HMGCRP04035 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.51■■□□□ 1.19
HMGCRP04035 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCRP04035 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.51■■□□□ 1.19
HMGCRP04035 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCRP04035 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.5■■□□□ 1.19
HMGCRP04035 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.5■■□□□ 1.19
HMGCRP04035 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
HMGCRP04035 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
HMGCRP04035 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.5■■□□□ 1.19
HMGCRP04035 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCRP04035 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.5■■□□□ 1.19
HMGCRP04035 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
HMGCRP04035 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCRP04035 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCRP04035 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.5■■□□□ 1.19
HMGCRP04035 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCRP04035 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.5■■□□□ 1.19
HMGCRP04035 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCRP04035 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
HMGCRP04035 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.5■■□□□ 1.19
HMGCRP04035 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCRP04035 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.5■■□□□ 1.19
HMGCRP04035 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.5■■□□□ 1.19
HMGCRP04035 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCRP04035 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCRP04035 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCRP04035 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
HMGCRP04035 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms