Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.55■□□□□ 0.88
IFNB1P01574 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
IFNB1P01574 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
IFNB1P01574 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.55■□□□□ 0.88
IFNB1P01574 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.55■□□□□ 0.88
IFNB1P01574 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.55■□□□□ 0.88
IFNB1P01574 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.55■□□□□ 0.88
IFNB1P01574 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.55■□□□□ 0.88
IFNB1P01574 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFNB1P01574 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.55■□□□□ 0.88
IFNB1P01574 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
IFNB1P01574 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
IFNB1P01574 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
IFNB1P01574 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
IFNB1P01574 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFNB1P01574 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
IFNB1P01574 PTBP1P-201ENST00000554374 1601 ntBASIC20.54■□□□□ 0.88
IFNB1P01574 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
IFNB1P01574 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFNB1P01574 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.54■□□□□ 0.88
IFNB1P01574 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.54■□□□□ 0.88
IFNB1P01574 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.54■□□□□ 0.88
IFNB1P01574 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
IFNB1P01574 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
IFNB1P01574 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.54■□□□□ 0.88
IFNB1P01574 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFNB1P01574 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFNB1P01574 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.53■□□□□ 0.88
IFNB1P01574 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.53■□□□□ 0.88
IFNB1P01574 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFNB1P01574 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFNB1P01574 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
IFNB1P01574 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.53■□□□□ 0.88
IFNB1P01574 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.53■□□□□ 0.88
IFNB1P01574 AC100791.3-201ENST00000617619 330 ntBASIC20.53■□□□□ 0.88
IFNB1P01574 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
IFNB1P01574 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFNB1P01574 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFNB1P01574 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
IFNB1P01574 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.53■□□□□ 0.88
IFNB1P01574 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFNB1P01574 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
IFNB1P01574 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
IFNB1P01574 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IFNB1P01574 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IFNB1P01574 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IFNB1P01574 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
IFNB1P01574 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.52■□□□□ 0.88
IFNB1P01574 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.52■□□□□ 0.88
IFNB1P01574 AC026271.2-201ENST00000428091 497 ntBASIC20.52■□□□□ 0.88
IFNB1P01574 RARRES2P6-201ENST00000567333 442 ntBASIC20.52■□□□□ 0.88
IFNB1P01574 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.52■□□□□ 0.88
IFNB1P01574 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IFNB1P01574 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.52■□□□□ 0.88
IFNB1P01574 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.52■□□□□ 0.88
IFNB1P01574 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
IFNB1P01574 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
IFNB1P01574 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
IFNB1P01574 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
IFNB1P01574 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
IFNB1P01574 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFNB1P01574 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFNB1P01574 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
IFNB1P01574 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
IFNB1P01574 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.51■□□□□ 0.87
IFNB1P01574 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFNB1P01574 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFNB1P01574 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
IFNB1P01574 KRT18P68-201ENST00000392293 1000 ntBASIC20.51■□□□□ 0.87
IFNB1P01574 AC006015.1-201ENST00000429970 570 ntBASIC20.51■□□□□ 0.87
IFNB1P01574 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.51■□□□□ 0.87
IFNB1P01574 CYP2T1P-201ENST00000432607 1285 ntBASIC20.51■□□□□ 0.87
IFNB1P01574 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.51■□□□□ 0.87
IFNB1P01574 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
IFNB1P01574 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IFNB1P01574 AC105020.6-201ENST00000621523 1217 ntBASIC20.51■□□□□ 0.87
IFNB1P01574 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.51■□□□□ 0.87
IFNB1P01574 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.51■□□□□ 0.87
IFNB1P01574 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFNB1P01574 KRT8P17-201ENST00000453110 1448 ntBASIC20.51■□□□□ 0.87
IFNB1P01574 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IFNB1P01574 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFNB1P01574 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
IFNB1P01574 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IFNB1P01574 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFNB1P01574 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
IFNB1P01574 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFNB1P01574 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFNB1P01574 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms