Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN1O95832 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.77■□□□□ 0.43
CLDN1O95832 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN1O95832 AC010542.4-201ENST00000563151 1910 ntBASIC17.76■□□□□ 0.43
CLDN1O95832 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN1O95832 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CLDN1O95832 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN1O95832 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN1O95832 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN1O95832 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN1O95832 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN1O95832 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN1O95832 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN1O95832 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN1O95832 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN1O95832 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN1O95832 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.76■□□□□ 0.43
CLDN1O95832 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLDN1O95832 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLDN1O95832 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN1O95832 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN1O95832 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLDN1O95832 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN1O95832 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN1O95832 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN1O95832 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN1O95832 KRT18P56-201ENST00000507275 550 ntBASIC17.75■□□□□ 0.43
CLDN1O95832 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN1O95832 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
CLDN1O95832 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN1O95832 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 AC091076.1-201ENST00000610741 619 ntBASIC17.75■□□□□ 0.43
CLDN1O95832 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CLDN1O95832 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN1O95832 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN1O95832 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CLDN1O95832 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN1O95832 FAM99A-202ENST00000538190 1989 ntBASIC17.75■□□□□ 0.43
CLDN1O95832 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN1O95832 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN1O95832 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN1O95832 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN1O95832 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN1O95832 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLDN1O95832 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDN1O95832 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.74■□□□□ 0.43
CLDN1O95832 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDN1O95832 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
CLDN1O95832 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN1O95832 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN1O95832 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN1O95832 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN1O95832 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN1O95832 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN1O95832 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN1O95832 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN1O95832 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN1O95832 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN1O95832 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN1O95832 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLDN1O95832 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms