Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST1O76090 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.94■□□□□ 0.94
BEST1O76090 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.94■□□□□ 0.94
BEST1O76090 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST1O76090 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST1O76090 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST1O76090 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.93■□□□□ 0.94
BEST1O76090 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.93■□□□□ 0.94
BEST1O76090 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
BEST1O76090 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.93■□□□□ 0.94
BEST1O76090 KRASP1-201ENST00000407852 552 ntBASIC20.93■□□□□ 0.94
BEST1O76090 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.93■□□□□ 0.94
BEST1O76090 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.93■□□□□ 0.94
BEST1O76090 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.93■□□□□ 0.94
BEST1O76090 AL121906.2-201ENST00000621597 723 ntBASIC20.93■□□□□ 0.94
BEST1O76090 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.93■□□□□ 0.94
BEST1O76090 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
BEST1O76090 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
BEST1O76090 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
BEST1O76090 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST1O76090 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.92■□□□□ 0.94
BEST1O76090 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.92■□□□□ 0.94
BEST1O76090 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
BEST1O76090 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 AC239809.2-201ENST00000415381 517 ntBASIC20.92■□□□□ 0.94
BEST1O76090 AC133681.1-201ENST00000465482 601 ntBASIC20.92■□□□□ 0.94
BEST1O76090 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.92■□□□□ 0.94
BEST1O76090 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.92■□□□□ 0.94
BEST1O76090 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.92■□□□□ 0.94
BEST1O76090 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.92■□□□□ 0.94
BEST1O76090 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.92■□□□□ 0.94
BEST1O76090 FAM197Y4-202ENST00000622692 608 ntBASIC20.92■□□□□ 0.94
BEST1O76090 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 AC116351.2-201ENST00000606540 1585 ntBASIC20.92■□□□□ 0.94
BEST1O76090 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.92■□□□□ 0.94
BEST1O76090 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
BEST1O76090 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 LINC01521-201ENST00000504184 1943 ntBASIC20.92■□□□□ 0.94
BEST1O76090 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.92■□□□□ 0.94
BEST1O76090 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST1O76090 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
BEST1O76090 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BEST1O76090 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
BEST1O76090 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BEST1O76090 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
BEST1O76090 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BEST1O76090 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.91■□□□□ 0.94
BEST1O76090 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.91■□□□□ 0.94
BEST1O76090 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.91■□□□□ 0.94
BEST1O76090 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.91■□□□□ 0.94
BEST1O76090 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.91■□□□□ 0.94
BEST1O76090 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BEST1O76090 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.91■□□□□ 0.94
BEST1O76090 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.91■□□□□ 0.94
BEST1O76090 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.91■□□□□ 0.94
BEST1O76090 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.91■□□□□ 0.94
BEST1O76090 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
BEST1O76090 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
BEST1O76090 AC018553.1-201ENST00000616682 1458 ntBASIC20.91■□□□□ 0.94
BEST1O76090 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.91■□□□□ 0.94
BEST1O76090 PHGDH-210ENST00000641115 1638 ntBASIC20.91■□□□□ 0.94
BEST1O76090 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BEST1O76090 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BEST1O76090 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BEST1O76090 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
BEST1O76090 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.9■□□□□ 0.94
BEST1O76090 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms