Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.09■□□□□ 0.65
SNRNP200O75643 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.09■□□□□ 0.65
SNRNP200O75643 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
SNRNP200O75643 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP200O75643 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SNRNP200O75643 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
SNRNP200O75643 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNRNP200O75643 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SNRNP200O75643 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.08■□□□□ 0.65
SNRNP200O75643 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNRNP200O75643 PHGDH-210ENST00000641115 1638 ntBASIC19.08■□□□□ 0.64
SNRNP200O75643 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNRNP200O75643 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNRNP200O75643 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.08■□□□□ 0.64
SNRNP200O75643 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.08■□□□□ 0.64
SNRNP200O75643 UNC93B4-201ENST00000505679 747 ntBASIC19.08■□□□□ 0.64
SNRNP200O75643 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.08■□□□□ 0.64
SNRNP200O75643 AL023875.1-201ENST00000640777 796 ntBASIC19.08■□□□□ 0.64
SNRNP200O75643 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.08■□□□□ 0.64
SNRNP200O75643 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNRNP200O75643 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.07■□□□□ 0.64
SNRNP200O75643 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SNRNP200O75643 KRASP1-201ENST00000407852 552 ntBASIC19.07■□□□□ 0.64
SNRNP200O75643 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.07■□□□□ 0.64
SNRNP200O75643 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.07■□□□□ 0.64
SNRNP200O75643 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRNP200O75643 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.07■□□□□ 0.64
SNRNP200O75643 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRNP200O75643 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 YBX1P10-201ENST00000444752 975 ntBASIC19.07■□□□□ 0.64
SNRNP200O75643 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.07■□□□□ 0.64
SNRNP200O75643 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SNRNP200O75643 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SNRNP200O75643 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.07■□□□□ 0.64
SNRNP200O75643 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP200O75643 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRNP200O75643 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP200O75643 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP200O75643 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP200O75643 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP200O75643 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SNRNP200O75643 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.06■□□□□ 0.64
SNRNP200O75643 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.06■□□□□ 0.64
SNRNP200O75643 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.06■□□□□ 0.64
SNRNP200O75643 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.06■□□□□ 0.64
SNRNP200O75643 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNRNP200O75643 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP200O75643 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.06■□□□□ 0.64
SNRNP200O75643 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SNRNP200O75643 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SNRNP200O75643 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SNRNP200O75643 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.06■□□□□ 0.64
SNRNP200O75643 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNRNP200O75643 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP200O75643 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP200O75643 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.05■□□□□ 0.64
SNRNP200O75643 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP200O75643 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRNP200O75643 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SNRNP200O75643 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRNP200O75643 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SNRNP200O75643 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP200O75643 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP200O75643 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SNRNP200O75643 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP200O75643 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRNP200O75643 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRNP200O75643 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP200O75643 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SNRNP200O75643 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP200O75643 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SNRNP200O75643 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNRNP200O75643 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SNRNP200O75643 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.04■□□□□ 0.64
SNRNP200O75643 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP200O75643 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNRNP200O75643 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
SNRNP200O75643 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP200O75643 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP200O75643 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP200O75643 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.04■□□□□ 0.64
SNRNP200O75643 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SNRNP200O75643 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP200O75643 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.04■□□□□ 0.64
SNRNP200O75643 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP200O75643 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms