Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.55■□□□□ 0.56
HCN1O60741 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HCN1O60741 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.55■□□□□ 0.56
HCN1O60741 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.55■□□□□ 0.56
HCN1O60741 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.55■□□□□ 0.56
HCN1O60741 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HCN1O60741 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.55■□□□□ 0.56
HCN1O60741 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.55■□□□□ 0.56
HCN1O60741 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.55■□□□□ 0.56
HCN1O60741 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.55■□□□□ 0.56
HCN1O60741 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.55■□□□□ 0.56
HCN1O60741 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
HCN1O60741 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.55■□□□□ 0.56
HCN1O60741 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.54■□□□□ 0.56
HCN1O60741 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.54■□□□□ 0.56
HCN1O60741 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.54■□□□□ 0.56
HCN1O60741 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.54■□□□□ 0.56
HCN1O60741 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.54■□□□□ 0.56
HCN1O60741 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.54■□□□□ 0.56
HCN1O60741 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 PGM5P4-201ENST00000421970 445 ntBASIC18.54■□□□□ 0.56
HCN1O60741 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.54■□□□□ 0.56
HCN1O60741 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.54■□□□□ 0.56
HCN1O60741 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HCN1O60741 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 ITM2C-210ENST00000620962 501 ntBASIC18.54■□□□□ 0.56
HCN1O60741 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HCN1O60741 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCN1O60741 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HCN1O60741 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HCN1O60741 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.53■□□□□ 0.56
HCN1O60741 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HCN1O60741 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCN1O60741 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCN1O60741 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HCN1O60741 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HCN1O60741 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HCN1O60741 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCN1O60741 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HCN1O60741 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.53■□□□□ 0.56
HCN1O60741 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HCN1O60741 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.53■□□□□ 0.56
HCN1O60741 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
HCN1O60741 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.53■□□□□ 0.56
HCN1O60741 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCN1O60741 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCN1O60741 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HCN1O60741 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCN1O60741 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
HCN1O60741 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HCN1O60741 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.52■□□□□ 0.56
HCN1O60741 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCN1O60741 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCN1O60741 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HCN1O60741 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.52■□□□□ 0.56
HCN1O60741 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.52■□□□□ 0.56
HCN1O60741 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCN1O60741 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HCN1O60741 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCN1O60741 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCN1O60741 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HCN1O60741 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.52■□□□□ 0.56
HCN1O60741 KRT18P29-201ENST00000397031 1267 ntBASIC18.52■□□□□ 0.56
HCN1O60741 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HCN1O60741 AC105020.6-201ENST00000621523 1217 ntBASIC18.52■□□□□ 0.56
HCN1O60741 HLA-B-256ENST00000639848 1089 ntBASIC18.52■□□□□ 0.56
HCN1O60741 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.52■□□□□ 0.56
HCN1O60741 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
HCN1O60741 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.52■□□□□ 0.55
HCN1O60741 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HCN1O60741 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HCN1O60741 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms