Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM38O00635 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
TRIM38O00635 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM38O00635 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM38O00635 AC027702.1-201ENST00000563810 1770 ntBASIC19.98■□□□□ 0.79
TRIM38O00635 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM38O00635 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM38O00635 PCDHAC2-203ENST00000615316 3011 ntBASIC19.98■□□□□ 0.79
TRIM38O00635 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM38O00635 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM38O00635 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM38O00635 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM38O00635 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM38O00635 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM38O00635 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM38O00635 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM38O00635 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM38O00635 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM38O00635 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM38O00635 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM38O00635 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM38O00635 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM38O00635 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM38O00635 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
TRIM38O00635 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM38O00635 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRIM38O00635 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TRIM38O00635 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM38O00635 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.97■□□□□ 0.79
TRIM38O00635 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
TRIM38O00635 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRIM38O00635 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRIM38O00635 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TRIM38O00635 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM38O00635 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM38O00635 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM38O00635 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.96■□□□□ 0.79
TRIM38O00635 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
TRIM38O00635 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 SNORA78-201ENST00000459373 127 ntBASIC19.96■□□□□ 0.79
TRIM38O00635 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
TRIM38O00635 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM38O00635 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.96■□□□□ 0.79
TRIM38O00635 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM38O00635 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM38O00635 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM38O00635 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM38O00635 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 AC087633.2-202ENST00000565166 1439 ntBASIC19.95■□□□□ 0.78
TRIM38O00635 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM38O00635 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM38O00635 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRIM38O00635 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM38O00635 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM38O00635 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.95■□□□□ 0.78
TRIM38O00635 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRIM38O00635 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
TRIM38O00635 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
TRIM38O00635 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM38O00635 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM38O00635 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms