Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCRL2O00421 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCRL2O00421 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCRL2O00421 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCRL2O00421 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCRL2O00421 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
CCRL2O00421 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.84■□□□□ 0.45
CCRL2O00421 AC116050.2-201ENST00000612102 1779 ntBASIC17.84■□□□□ 0.45
CCRL2O00421 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.84■□□□□ 0.45
CCRL2O00421 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCRL2O00421 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCRL2O00421 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.83■□□□□ 0.45
CCRL2O00421 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.83■□□□□ 0.45
CCRL2O00421 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.83■□□□□ 0.45
CCRL2O00421 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CCRL2O00421 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CCRL2O00421 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CCRL2O00421 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.83■□□□□ 0.44
CCRL2O00421 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.83■□□□□ 0.44
CCRL2O00421 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.83■□□□□ 0.44
CCRL2O00421 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.83■□□□□ 0.44
CCRL2O00421 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.83■□□□□ 0.44
CCRL2O00421 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.83■□□□□ 0.44
CCRL2O00421 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCRL2O00421 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CCRL2O00421 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.82■□□□□ 0.44
CCRL2O00421 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CCRL2O00421 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCRL2O00421 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCRL2O00421 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.82■□□□□ 0.44
CCRL2O00421 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCRL2O00421 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.82■□□□□ 0.44
CCRL2O00421 AC245052.3-201ENST00000450182 901 ntBASIC17.82■□□□□ 0.44
CCRL2O00421 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.82■□□□□ 0.44
CCRL2O00421 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.82■□□□□ 0.44
CCRL2O00421 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.82■□□□□ 0.44
CCRL2O00421 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CCRL2O00421 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCRL2O00421 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCRL2O00421 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.81■□□□□ 0.44
CCRL2O00421 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CCRL2O00421 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.81■□□□□ 0.44
CCRL2O00421 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
CCRL2O00421 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCRL2O00421 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 POU5F1P4-201ENST00000413175 1085 ntBASIC17.81■□□□□ 0.44
CCRL2O00421 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 AC008175.2-201ENST00000612840 297 ntBASIC17.81■□□□□ 0.44
CCRL2O00421 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCRL2O00421 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.81■□□□□ 0.44
CCRL2O00421 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CCRL2O00421 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CCRL2O00421 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.81■□□□□ 0.44
CCRL2O00421 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCRL2O00421 KRT8P36-201ENST00000489121 1440 ntBASIC17.81■□□□□ 0.44
CCRL2O00421 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCRL2O00421 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCRL2O00421 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCRL2O00421 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CCRL2O00421 UNC93B3-201ENST00000308076 687 ntBASIC17.8■□□□□ 0.44
CCRL2O00421 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCRL2O00421 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.8■□□□□ 0.44
CCRL2O00421 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms