Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC188H7C350 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC188H7C350 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC188H7C350 AP001271.2-201ENST00000624018 1556 ntBASIC20.68■□□□□ 0.9
CCDC188H7C350 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC188H7C350 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC188H7C350 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC188H7C350 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC188H7C350 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC188H7C350 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC188H7C350 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC188H7C350 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC188H7C350 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC188H7C350 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC188H7C350 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC188H7C350 TERF1P2-201ENST00000583350 1212 ntBASIC20.68■□□□□ 0.9
CCDC188H7C350 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC188H7C350 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC188H7C350 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC188H7C350 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC188H7C350 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC188H7C350 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC188H7C350 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC188H7C350 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC188H7C350 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC188H7C350 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC188H7C350 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC188H7C350 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 AC123595.1-201ENST00000440769 1046 ntBASIC20.67■□□□□ 0.9
CCDC188H7C350 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CCDC188H7C350 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC188H7C350 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC188H7C350 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC188H7C350 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC188H7C350 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 KRT16P6-202ENST00000425692 1426 ntBASIC20.67■□□□□ 0.9
CCDC188H7C350 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 CYP21A1P-202ENST00000354927 1481 ntBASIC20.67■□□□□ 0.9
CCDC188H7C350 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC188H7C350 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC188H7C350 LINC01465-201ENST00000408887 1940 ntBASIC20.66■□□□□ 0.9
CCDC188H7C350 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC188H7C350 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC188H7C350 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC188H7C350 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC188H7C350 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC188H7C350 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC188H7C350 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC188H7C350 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC188H7C350 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC188H7C350 AC142381.2-201ENST00000566120 298 ntBASIC20.66■□□□□ 0.9
CCDC188H7C350 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC188H7C350 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC188H7C350 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC188H7C350 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CCDC188H7C350 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC188H7C350 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC188H7C350 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CCDC188H7C350 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC188H7C350 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC188H7C350 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC188H7C350 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC188H7C350 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC188H7C350 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC188H7C350 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC188H7C350 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC188H7C350 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CCDC188H7C350 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
CCDC188H7C350 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC188H7C350 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC188H7C350 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms