Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC01548A6NM66 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01548A6NM66 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01548A6NM66 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LINC01548A6NM66 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01548A6NM66 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01548A6NM66 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01548A6NM66 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
LINC01548A6NM66 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC01548A6NM66 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01548A6NM66 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
LINC01548A6NM66 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LINC01548A6NM66 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01548A6NM66 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01548A6NM66 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01548A6NM66 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01548A6NM66 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01548A6NM66 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01548A6NM66 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01548A6NM66 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01548A6NM66 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 AL691432.2-201ENST00000607222 2038 ntBASIC15.71■□□□□ 0.11
LINC01548A6NM66 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01548A6NM66 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.71■□□□□ 0.1
LINC01548A6NM66 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC01548A6NM66 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LINC01548A6NM66 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LINC01548A6NM66 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.7■□□□□ 0.1
LINC01548A6NM66 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC01548A6NM66 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
LINC01548A6NM66 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINC01548A6NM66 AC098590.1-201ENST00000468126 897 ntBASIC15.7■□□□□ 0.1
LINC01548A6NM66 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC01548A6NM66 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC01548A6NM66 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
LINC01548A6NM66 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LINC01548A6NM66 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC01548A6NM66 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01548A6NM66 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 KRT16P6-202ENST00000425692 1426 ntBASIC15.69■□□□□ 0.1
LINC01548A6NM66 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 RN7SL471P-201ENST00000580476 299 ntBASIC15.69■□□□□ 0.1
LINC01548A6NM66 MTDHP1-201ENST00000605323 784 ntBASIC15.69■□□□□ 0.1
LINC01548A6NM66 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01548A6NM66 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC01548A6NM66 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC01548A6NM66 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC01548A6NM66 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01548A6NM66 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01548A6NM66 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LINC01548A6NM66 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01548A6NM66 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01548A6NM66 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01548A6NM66 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC01548A6NM66 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01548A6NM66 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01548A6NM66 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01548A6NM66 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01548A6NM66 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01548A6NM66 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms