Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PLEKHD1A6NEE1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 AP000692.2-201ENST00000608391 879 ntBASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PLEKHD1A6NEE1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 AC117947.1-201ENST00000427448 529 ntBASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 AL358472.4-201ENST00000633140 710 ntBASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PLEKHD1A6NEE1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 TUBB8P6-201ENST00000436895 1288 ntBASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 AC091390.4-202ENST00000476426 537 ntBASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 LINC01238-205ENST00000567549 1107 ntBASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 AC091076.1-201ENST00000610741 619 ntBASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PLEKHD1A6NEE1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PLEKHD1A6NEE1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
PLEKHD1A6NEE1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
PLEKHD1A6NEE1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
PLEKHD1A6NEE1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PLEKHD1A6NEE1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PLEKHD1A6NEE1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
PLEKHD1A6NEE1 HMGA1P5-201ENST00000412453 271 ntBASIC30.76■■■□□ 2.51
PLEKHD1A6NEE1 UPK3BP1-201ENST00000428678 509 ntBASIC30.76■■■□□ 2.51
PLEKHD1A6NEE1 MYC-208ENST00000641036 567 ntBASIC30.76■■■□□ 2.51
PLEKHD1A6NEE1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PLEKHD1A6NEE1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
PLEKHD1A6NEE1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC30.76■■■□□ 2.51
PLEKHD1A6NEE1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC30.75■■■□□ 2.51
PLEKHD1A6NEE1 FAM8A6P-201ENST00000407496 1135 ntBASIC30.75■■■□□ 2.51
PLEKHD1A6NEE1 SLC25A1P4-201ENST00000567977 778 ntBASIC30.75■■■□□ 2.51
PLEKHD1A6NEE1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC30.75■■■□□ 2.51
PLEKHD1A6NEE1 AL138966.2-201ENST00000621997 464 ntBASIC30.75■■■□□ 2.51
PLEKHD1A6NEE1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PLEKHD1A6NEE1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PLEKHD1A6NEE1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC30.75■■■□□ 2.51
PLEKHD1A6NEE1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PLEKHD1A6NEE1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PLEKHD1A6NEE1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PLEKHD1A6NEE1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PLEKHD1A6NEE1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC30.74■■■□□ 2.51
PLEKHD1A6NEE1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC30.74■■■□□ 2.51
PLEKHD1A6NEE1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC30.74■■■□□ 2.51
PLEKHD1A6NEE1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC30.74■■■□□ 2.51
PLEKHD1A6NEE1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PLEKHD1A6NEE1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PLEKHD1A6NEE1 AC005229.4-201ENST00000610085 2198 ntBASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC30.73■■■□□ 2.51
PLEKHD1A6NEE1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC30.72■■■□□ 2.51
PLEKHD1A6NEE1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC30.72■■■□□ 2.51
PLEKHD1A6NEE1 AC018553.1-201ENST00000616682 1458 ntBASIC30.72■■■□□ 2.51
PLEKHD1A6NEE1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC30.72■■■□□ 2.51
PLEKHD1A6NEE1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC30.72■■■□□ 2.51
PLEKHD1A6NEE1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
PLEKHD1A6NEE1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
PLEKHD1A6NEE1 AC008040.2-201ENST00000461049 708 ntBASIC30.72■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms