Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 AP001330.3-201ENST00000520123 633 ntBASIC17.34■□□□□ 0.37
SHISA3A0PJX4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 AC008406.3-201ENST00000620001 1374 ntBASIC17.34■□□□□ 0.37
SHISA3A0PJX4 AL355001.2-201ENST00000620617 1191 ntBASIC17.34■□□□□ 0.37
SHISA3A0PJX4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHISA3A0PJX4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.33■□□□□ 0.36
SHISA3A0PJX4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.33■□□□□ 0.36
SHISA3A0PJX4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.33■□□□□ 0.36
SHISA3A0PJX4 PTBP1P-201ENST00000554374 1601 ntBASIC17.32■□□□□ 0.36
SHISA3A0PJX4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 FAM21FP-204ENST00000608637 956 ntBASIC17.32■□□□□ 0.36
SHISA3A0PJX4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA3A0PJX4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 AC120498.9-201ENST00000339021 3867 ntBASIC17.31■□□□□ 0.36
SHISA3A0PJX4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA3A0PJX4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms