Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 AC009237.14-201ENST00000609975 1594 ntBASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 AC092171.4-201ENST00000609130 632 ntBASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-1A0A0B4J245 KRT8P33-201ENST00000508125 1423 ntBASIC13.96□□□□□ -0.18
TRAV12-1A0A0B4J245 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRAV12-1A0A0B4J245 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-1A0A0B4J245 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.96□□□□□ -0.18
TRAV12-1A0A0B4J245 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-1A0A0B4J245 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-1A0A0B4J245 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
TRAV12-1A0A0B4J245 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TRAV12-1A0A0B4J245 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
TRAV12-1A0A0B4J245 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.96□□□□□ -0.18
TRAV12-1A0A0B4J245 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 AC009113.1-201ENST00000570267 2443 ntBASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 PCDHB18P-201ENST00000524813 2368 ntBASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 MBP-237ENST00000579129 1052 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-1A0A0B4J245 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 AL033527.3-201ENST00000566366 1196 ntBASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 SYT6-210ENST00000641643 1587 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms