Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 TNXA-203ENST00000507684 2038 ntBASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 H19-201ENST00000411754 1788 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV23DV6A0A075B6W5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 POU5F1P4-201ENST00000413175 1085 ntBASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 MIR4466-201ENST00000606121 54 ntBASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 MIR2861-201ENST00000636310 90 ntBASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 AL035685.1-201ENST00000636663 812 ntBASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 AC106820.2-201ENST00000563775 3264 ntBASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV23DV6A0A075B6W5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 MIR4767-201ENST00000582827 78 ntBASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV23DV6A0A075B6W5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 AC005332.7-201ENST00000614046 2005 ntBASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV23DV6A0A075B6W5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms