Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AC104837.1-201ENST00000444644 1587 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 RNA5SP382-201ENST00000363355 112 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 RN7SKP130-201ENST00000364924 301 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 RN7SKP146-201ENST00000410242 334 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 RNA5SP155-201ENST00000411154 129 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 DUTP4-201ENST00000424782 475 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AL596268.1-201ENST00000427910 1048 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 IGLVV-66-201ENST00000523818 341 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 PPIAP6-201ENST00000557078 499 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 RPSAP68-201ENST00000625020 438 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 MKI67P1-201ENST00000604297 1460 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 AC092646.2-201ENST00000431242 2095 ntBASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA1Q9UND3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC020978.6-201ENST00000571197 3177 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 SNORA7A-201ENST00000384765 139 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AHCYP8-201ENST00000425108 209 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 HMGN1P6-201ENST00000438508 291 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 E2F6P3-201ENST00000441743 743 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AL354714.5-201ENST00000450131 590 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 RPL34P34-201ENST00000465389 354 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 RN7SL37P-201ENST00000490461 307 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC095057.1-201ENST00000507583 168 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 MTCYBP44-201ENST00000514835 823 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC093878.1-201ENST00000515630 432 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC127071.2-201ENST00000623293 527 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 AC027559.1-201ENST00000636288 271 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms