Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC8.5□□□□□ -1.05
COL15A1P39059 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC8.5□□□□□ -1.05
COL15A1P39059 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC8.5□□□□□ -1.05
COL15A1P39059 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC8.5□□□□□ -1.05
COL15A1P39059 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.5□□□□□ -1.05
COL15A1P39059 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
COL15A1P39059 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.5□□□□□ -1.05
COL15A1P39059 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.5□□□□□ -1.05
COL15A1P39059 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC8.5□□□□□ -1.05
COL15A1P39059 AC015871.3-201ENST00000618835 2261 ntBASIC8.5□□□□□ -1.05
COL15A1P39059 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
COL15A1P39059 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.5□□□□□ -1.05
COL15A1P39059 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.5□□□□□ -1.05
COL15A1P39059 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL15A1P39059 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
COL15A1P39059 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL15A1P39059 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL15A1P39059 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
COL15A1P39059 AL035422.1-201ENST00000414193 397 ntBASIC8.49□□□□□ -1.05
COL15A1P39059 AC108479.1-201ENST00000431142 427 ntBASIC8.49□□□□□ -1.05
COL15A1P39059 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC8.49□□□□□ -1.05
COL15A1P39059 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.49□□□□□ -1.05
COL15A1P39059 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.49□□□□□ -1.05
COL15A1P39059 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.49□□□□□ -1.05
COL15A1P39059 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.49□□□□□ -1.05
COL15A1P39059 HMGN1P17-201ENST00000513734 295 ntBASIC8.49□□□□□ -1.05
COL15A1P39059 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.49□□□□□ -1.05
COL15A1P39059 RPL3P13-201ENST00000550415 216 ntBASIC8.49□□□□□ -1.05
COL15A1P39059 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL15A1P39059 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.49□□□□□ -1.05
COL15A1P39059 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.49□□□□□ -1.05
COL15A1P39059 AC026898.1-201ENST00000586404 571 ntBASIC8.49□□□□□ -1.05
COL15A1P39059 GLYATL1P2-202ENST00000588046 902 ntBASIC8.49□□□□□ -1.05
COL15A1P39059 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.49□□□□□ -1.05
COL15A1P39059 OSTC-205ENST00000613215 876 ntTSL 2 BASIC8.49□□□□□ -1.05
COL15A1P39059 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC8.49□□□□□ -1.05
COL15A1P39059 AC183089.2-201ENST00000637931 916 ntBASIC8.49□□□□□ -1.05
COL15A1P39059 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.49□□□□□ -1.05
COL15A1P39059 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL15A1P39059 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.49□□□□□ -1.05
COL15A1P39059 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL15A1P39059 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL15A1P39059 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.49□□□□□ -1.05
COL15A1P39059 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL15A1P39059 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
COL15A1P39059 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
COL15A1P39059 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL15A1P39059 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.49□□□□□ -1.05
COL15A1P39059 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
COL15A1P39059 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
COL15A1P39059 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 AC115283.1-201ENST00000427353 400 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 AC083862.1-201ENST00000427378 1242 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 CDK7P1-201ENST00000434574 693 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC8.48□□□□□ -1.05
COL15A1P39059 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.48□□□□□ -1.05
COL15A1P39059 AL133399.1-201ENST00000527476 298 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC8.48□□□□□ -1.05
COL15A1P39059 AC091768.1-201ENST00000609258 930 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.48□□□□□ -1.05
COL15A1P39059 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
COL15A1P39059 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.48□□□□□ -1.05
COL15A1P39059 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC8.48□□□□□ -1.05
COL15A1P39059 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
COL15A1P39059 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.48□□□□□ -1.05
COL15A1P39059 RACGAP1P-201ENST00000550663 1879 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.48□□□□□ -1.05
COL15A1P39059 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
COL15A1P39059 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
COL15A1P39059 AP003486.1-201ENST00000525716 3994 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
COL15A1P39059 AC005702.3-201ENST00000585345 1447 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.48□□□□□ -1.05
COL15A1P39059 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.48□□□□□ -1.05
COL15A1P39059 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.48□□□□□ -1.05
COL15A1P39059 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
COL15A1P39059 SNORA11B-201ENST00000408175 129 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 RPL31-202ENST00000409000 641 ntTSL 2 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms