Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MIR3689C-201ENST00000581239 72 ntBASIC6.28□□□□□ -1.4
NCK1P16333 AL157899.1-201ENST00000604110 936 ntBASIC6.28□□□□□ -1.4
NCK1P16333 AC005070.2-201ENST00000604391 260 ntBASIC6.28□□□□□ -1.4
NCK1P16333 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC6.28□□□□□ -1.4
NCK1P16333 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.28□□□□□ -1.4
NCK1P16333 TCL6_3.1-201ENST00000619064 137 ntBASIC6.28□□□□□ -1.4
NCK1P16333 PART1_3.1-201ENST00000619680 131 ntBASIC6.28□□□□□ -1.4
NCK1P16333 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NCK1P16333 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NCK1P16333 AC102941.1-201ENST00000567616 1537 ntBASIC6.28□□□□□ -1.4
NCK1P16333 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.28□□□□□ -1.4
NCK1P16333 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NCK1P16333 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
NCK1P16333 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NCK1P16333 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.28□□□□□ -1.4
NCK1P16333 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
NCK1P16333 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.27□□□□□ -1.41
NCK1P16333 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
NCK1P16333 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.27□□□□□ -1.41
NCK1P16333 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.27□□□□□ -1.41
NCK1P16333 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NCK1P16333 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NCK1P16333 RNU1-46P-201ENST00000384425 164 ntBASIC6.27□□□□□ -1.41
NCK1P16333 RPS3AP5-201ENST00000389400 821 ntBASIC6.27□□□□□ -1.41
NCK1P16333 OR7E91P-201ENST00000400027 866 ntBASIC6.27□□□□□ -1.41
NCK1P16333 AL035467.1-201ENST00000403583 686 ntBASIC6.27□□□□□ -1.41
NCK1P16333 AC134879.1-201ENST00000426062 394 ntBASIC6.27□□□□□ -1.41
NCK1P16333 AC007365.2-201ENST00000428806 458 ntBASIC6.27□□□□□ -1.41
NCK1P16333 RPL22P11-201ENST00000434894 385 ntBASIC6.27□□□□□ -1.41
NCK1P16333 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.27□□□□□ -1.41
NCK1P16333 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC6.27□□□□□ -1.41
NCK1P16333 RPL23AP28-201ENST00000448062 470 ntBASIC6.27□□□□□ -1.41
NCK1P16333 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.27□□□□□ -1.41
NCK1P16333 AC016489.1-201ENST00000461109 375 ntBASIC6.27□□□□□ -1.41
NCK1P16333 RN7SL182P-201ENST00000496499 300 ntBASIC6.27□□□□□ -1.41
NCK1P16333 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.27□□□□□ -1.41
NCK1P16333 AC083906.1-201ENST00000509298 406 ntBASIC6.27□□□□□ -1.41
NCK1P16333 OR51A1P-201ENST00000511110 946 ntBASIC6.27□□□□□ -1.41
NCK1P16333 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 RNA5SP116-201ENST00000516132 98 ntBASIC6.27□□□□□ -1.41
NCK1P16333 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.27□□□□□ -1.41
NCK1P16333 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.27□□□□□ -1.41
NCK1P16333 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.27□□□□□ -1.41
NCK1P16333 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
NCK1P16333 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.27□□□□□ -1.41
NCK1P16333 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.27□□□□□ -1.41
NCK1P16333 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.27□□□□□ -1.41
NCK1P16333 AC011447.2-201ENST00000592921 283 ntBASIC6.27□□□□□ -1.41
NCK1P16333 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.27□□□□□ -1.41
NCK1P16333 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.27□□□□□ -1.41
NCK1P16333 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.27□□□□□ -1.41
NCK1P16333 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC6.27□□□□□ -1.41
NCK1P16333 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.27□□□□□ -1.41
NCK1P16333 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 NR1H5P-201ENST00000452683 1377 ntBASIC6.27□□□□□ -1.41
NCK1P16333 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.27□□□□□ -1.41
NCK1P16333 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
NCK1P16333 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
NCK1P16333 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
NCK1P16333 AL022323.4-201ENST00000623980 13120 ntBASIC6.27□□□□□ -1.41
NCK1P16333 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NCK1P16333 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
NCK1P16333 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
NCK1P16333 AL162456.1-201ENST00000634535 2006 ntBASIC6.26□□□□□ -1.41
NCK1P16333 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NCK1P16333 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NCK1P16333 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NCK1P16333 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NCK1P16333 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NCK1P16333 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NCK1P16333 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NCK1P16333 RNU1-55P-201ENST00000365510 158 ntBASIC6.26□□□□□ -1.41
NCK1P16333 AL049697.3-201ENST00000406493 982 ntBASIC6.26□□□□□ -1.41
NCK1P16333 AL663061.1-201ENST00000416625 580 ntBASIC6.26□□□□□ -1.41
NCK1P16333 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.26□□□□□ -1.41
NCK1P16333 PRPS1P2-201ENST00000430496 937 ntBASIC6.26□□□□□ -1.41
NCK1P16333 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.26□□□□□ -1.41
NCK1P16333 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.26□□□□□ -1.41
NCK1P16333 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.26□□□□□ -1.41
NCK1P16333 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.26□□□□□ -1.41
NCK1P16333 AC019080.2-201ENST00000453859 394 ntBASIC6.26□□□□□ -1.41
NCK1P16333 RPSAP24-201ENST00000461543 873 ntBASIC6.26□□□□□ -1.41
NCK1P16333 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.26□□□□□ -1.41
NCK1P16333 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.26□□□□□ -1.41
NCK1P16333 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.26□□□□□ -1.41
NCK1P16333 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.26□□□□□ -1.41
NCK1P16333 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NCK1P16333 DPPA3P2-201ENST00000553589 478 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms