Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SPTA1P02549 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SPTA1P02549 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.21□□□□□ -1.41
SPTA1P02549 AC011891.2-201ENST00000604949 397 ntBASIC6.21□□□□□ -1.41
SPTA1P02549 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.21□□□□□ -1.41
SPTA1P02549 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.21□□□□□ -1.41
SPTA1P02549 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.21□□□□□ -1.41
SPTA1P02549 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SPTA1P02549 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.21□□□□□ -1.41
SPTA1P02549 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
SPTA1P02549 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SPTA1P02549 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SPTA1P02549 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.21□□□□□ -1.41
SPTA1P02549 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SPTA1P02549 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SPTA1P02549 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.21□□□□□ -1.41
SPTA1P02549 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
SPTA1P02549 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SPTA1P02549 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.21□□□□□ -1.42
SPTA1P02549 CR788268.1-201ENST00000603931 1809 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.21□□□□□ -1.42
SPTA1P02549 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC6.21□□□□□ -1.42
SPTA1P02549 UG0898H09-202ENST00000623646 7040 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SPTA1P02549 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.21□□□□□ -1.42
SPTA1P02549 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SPTA1P02549 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC6.21□□□□□ -1.42
SPTA1P02549 RNA5SP77-201ENST00000365394 120 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SPTA1P02549 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.21□□□□□ -1.42
SPTA1P02549 AL354707.3-201ENST00000427308 331 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 GTF2IP14-201ENST00000441415 586 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 RPL21P133-201ENST00000443666 476 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 AC068228.1-201ENST00000461723 211 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 RN7SL413P-201ENST00000482700 297 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 AC087360.1-201ENST00000518788 616 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.21□□□□□ -1.42
SPTA1P02549 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SPTA1P02549 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.21□□□□□ -1.42
SPTA1P02549 AC233702.7-202ENST00000582941 211 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SPTA1P02549 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.21□□□□□ -1.42
SPTA1P02549 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.21□□□□□ -1.42
SPTA1P02549 AC114477.1-201ENST00000605097 605 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 MIR7854-201ENST00000620068 65 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SPTA1P02549 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SPTA1P02549 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC6.21□□□□□ -1.42
SPTA1P02549 AL121949.2-201ENST00000403446 1548 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 AL035563.1-201ENST00000609087 1539 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SPTA1P02549 ZNF806-201ENST00000438300 1774 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 EIF4BP5-201ENST00000567338 1795 ntBASIC6.21□□□□□ -1.42
SPTA1P02549 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SPTA1P02549 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC6.2□□□□□ -1.42
SPTA1P02549 RPL6P30-201ENST00000443382 862 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AC096743.1-201ENST00000485172 319 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AP005202.1-201ENST00000489915 867 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AC231760.1-201ENST00000498002 260 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AC021146.11-201ENST00000503319 491 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AC025458.1-201ENST00000506046 166 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.2□□□□□ -1.42
SPTA1P02549 GLUD1P2-201ENST00000583339 201 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AC116651.1-201ENST00000609724 556 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
SPTA1P02549 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.2□□□□□ -1.42
SPTA1P02549 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 AL354854.1-201ENST00000455940 1363 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC6.2□□□□□ -1.42
SPTA1P02549 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.2□□□□□ -1.42
SPTA1P02549 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.2□□□□□ -1.42
SPTA1P02549 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.2□□□□□ -1.42
SPTA1P02549 AC108479.1-201ENST00000431142 427 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 GAPDHP58-201ENST00000438477 1006 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 HMGN1P36-201ENST00000446623 298 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AC131233.1-201ENST00000479200 955 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.2□□□□□ -1.42
SPTA1P02549 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.2□□□□□ -1.42
SPTA1P02549 AC007255.2-201ENST00000604053 631 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AC006328.2-201ENST00000623198 397 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AC012005.2-201ENST00000624333 397 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.2□□□□□ -1.42
SPTA1P02549 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.2□□□□□ -1.42
SPTA1P02549 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SPTA1P02549 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.2□□□□□ -1.42
SPTA1P02549 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
SPTA1P02549 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.19□□□□□ -1.42
SPTA1P02549 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms