Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 LINC01613-201ENST00000561476 2780 ntBASIC8.06□□□□□ -1.12
PDS5AQ29RF7 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 RNA5SP512-201ENST00000364550 120 ntBASIC8.05□□□□□ -1.12
PDS5AQ29RF7 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 AC121758.1-202ENST00000556917 658 ntBASIC8.05□□□□□ -1.12
PDS5AQ29RF7 WBP1LP12-201ENST00000604449 331 ntBASIC8.05□□□□□ -1.12
PDS5AQ29RF7 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDS5AQ29RF7 AC090181.3-201ENST00000624777 1514 ntBASIC8.05□□□□□ -1.12
PDS5AQ29RF7 OR56A4-201ENST00000330728 1209 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 RNU1-84P-201ENST00000365447 164 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 RANP6-201ENST00000413691 644 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 RN7SL649P-201ENST00000496974 275 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 AC093664.1-201ENST00000511779 289 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 SNORA74.1-201ENST00000516320 180 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 RPL3P13-201ENST00000550415 216 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 AC092718.4-201ENST00000566639 716 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 AC011921.2-201ENST00000589465 152 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 OR1N1-202ENST00000619659 939 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 SNX18P10-201ENST00000625014 519 ntBASIC8.04□□□□□ -1.12
PDS5AQ29RF7 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.04□□□□□ -1.12
PDS5AQ29RF7 RN7SKP171-201ENST00000364417 303 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC096537.2-201ENST00000413707 714 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC083862.1-201ENST00000427378 1242 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC234771.2-201ENST00000445718 597 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 H3F3AP3-201ENST00000497682 407 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 RPL5P11-201ENST00000498068 893 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms