Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
COL4A5P29400 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 SAGE3P-201ENST00000619800 1635 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
COL4A5P29400 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
COL4A5P29400 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 RNF19BPY-201ENST00000458209 1550 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 AC122713.2-201ENST00000624942 3335 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 TMSB4XP2-201ENST00000335179 210 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.83□□□□□ -1.16
COL4A5P29400 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.83□□□□□ -1.16
COL4A5P29400 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.83□□□□□ -1.16
COL4A5P29400 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.83□□□□□ -1.16
COL4A5P29400 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.83□□□□□ -1.16
COL4A5P29400 PABPC1P1-201ENST00000506347 591 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.83□□□□□ -1.16
COL4A5P29400 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.83□□□□□ -1.16
COL4A5P29400 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.83□□□□□ -1.16
COL4A5P29400 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.83□□□□□ -1.16
COL4A5P29400 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.83□□□□□ -1.16
COL4A5P29400 AC126175.1-201ENST00000617041 758 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 OR7E91P-202ENST00000642062 1198 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC7.82□□□□□ -1.16
COL4A5P29400 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
COL4A5P29400 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC7.82□□□□□ -1.16
COL4A5P29400 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.82□□□□□ -1.16
COL4A5P29400 MBP-206ENST00000397863 4800 ntTSL 3 BASIC7.82□□□□□ -1.16
COL4A5P29400 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.82□□□□□ -1.16
COL4A5P29400 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.82□□□□□ -1.16
COL4A5P29400 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
COL4A5P29400 AL096711.1-201ENST00000404780 554 ntBASIC7.82□□□□□ -1.16
COL4A5P29400 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.82□□□□□ -1.16
COL4A5P29400 GAPDHP48-201ENST00000436626 961 ntBASIC7.82□□□□□ -1.16
COL4A5P29400 AC245047.5-201ENST00000437312 556 ntBASIC7.82□□□□□ -1.16
COL4A5P29400 ATP5LP2-201ENST00000440646 311 ntBASIC7.82□□□□□ -1.16
COL4A5P29400 AL161636.2-201ENST00000445179 927 ntBASIC7.82□□□□□ -1.16
COL4A5P29400 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.82□□□□□ -1.16
COL4A5P29400 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.82□□□□□ -1.16
COL4A5P29400 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.82□□□□□ -1.16
COL4A5P29400 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.82□□□□□ -1.16
COL4A5P29400 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.82□□□□□ -1.16
COL4A5P29400 AL591167.1-201ENST00000607321 456 ntBASIC7.82□□□□□ -1.16
COL4A5P29400 MIR6085-201ENST00000618314 110 ntBASIC7.82□□□□□ -1.16
COL4A5P29400 MIR6719-201ENST00000622428 87 ntBASIC7.82□□□□□ -1.16
COL4A5P29400 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
COL4A5P29400 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.82□□□□□ -1.16
COL4A5P29400 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.82□□□□□ -1.16
COL4A5P29400 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.82□□□□□ -1.16
COL4A5P29400 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.82□□□□□ -1.16
COL4A5P29400 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
COL4A5P29400 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL4A5P29400 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.81□□□□□ -1.16
COL4A5P29400 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
COL4A5P29400 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.81□□□□□ -1.16
COL4A5P29400 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 HSPD1P9-201ENST00000420325 1636 ntBASIC7.81□□□□□ -1.16
COL4A5P29400 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
COL4A5P29400 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.81□□□□□ -1.16
COL4A5P29400 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
COL4A5P29400 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 AC023490.2-201ENST00000359859 470 ntBASIC7.81□□□□□ -1.16
COL4A5P29400 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
COL4A5P29400 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.81□□□□□ -1.16
COL4A5P29400 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.81□□□□□ -1.16
COL4A5P29400 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.81□□□□□ -1.16
COL4A5P29400 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.81□□□□□ -1.16
COL4A5P29400 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.81□□□□□ -1.16
COL4A5P29400 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.81□□□□□ -1.16
COL4A5P29400 PRMT5P1-201ENST00000514351 598 ntBASIC7.81□□□□□ -1.16
COL4A5P29400 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC7.81□□□□□ -1.16
COL4A5P29400 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.81□□□□□ -1.16
COL4A5P29400 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.81□□□□□ -1.16
COL4A5P29400 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
COL4A5P29400 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 242.1 ms