Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RPL19P11-201ENST00000495944 589 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 LINC01613-201ENST00000561476 2780 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 RN7SKP250-201ENST00000363924 321 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 PLA2G12AP2-201ENST00000424744 264 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 RPSAP32-201ENST00000432681 526 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 COX4I1P2-201ENST00000447446 547 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 CREM-242ENST00000490511 469 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AP000662.1-201ENST00000530952 487 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 EEF1A1P17-201ENST00000547505 1275 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AC107958.1-201ENST00000556576 290 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 RPL21P50-201ENST00000417698 477 ntBASIC10.32□□□□□ -0.76
VPS8Q8N3P4 TVP23CP1-201ENST00000450317 639 ntBASIC10.32□□□□□ -0.76
VPS8Q8N3P4 MARK2P8-201ENST00000476069 952 ntBASIC10.32□□□□□ -0.76
VPS8Q8N3P4 AC044810.1-201ENST00000480271 711 ntBASIC10.32□□□□□ -0.76
VPS8Q8N3P4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 AC063943.2-201ENST00000495697 534 ntBASIC10.32□□□□□ -0.76
VPS8Q8N3P4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 AC135983.3-201ENST00000528049 1226 ntBASIC10.32□□□□□ -0.76
VPS8Q8N3P4 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 SYPL1P2-201ENST00000582878 727 ntBASIC10.32□□□□□ -0.76
VPS8Q8N3P4 AC063977.7-201ENST00000594454 337 ntBASIC10.32□□□□□ -0.76
VPS8Q8N3P4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS8Q8N3P4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 API5P1-201ENST00000424316 1510 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 PRELID1P1-201ENST00000403549 660 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 DHFRP2-201ENST00000414224 547 ntBASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms