Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC133552.4-201ENST00000576103 676 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AC010327.2-201ENST00000587647 488 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SHROOM1Q2M3G4 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
SHROOM1Q2M3G4 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.15
SHROOM1Q2M3G4 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.9□□□□□ -1.15
SHROOM1Q2M3G4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 MFSD8-217ENST00000641178 4374 ntBASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 AL359885.1-201ENST00000415786 903 ntBASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 AC002069.1-201ENST00000429649 1159 ntBASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 GAPDHP59-201ENST00000435908 267 ntBASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 AC068491.1-201ENST00000449539 1241 ntBASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 TDGP1-201ENST00000543961 1229 ntBASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 AC111186.1-201ENST00000604684 130 ntBASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 AC027348.2-201ENST00000624375 642 ntBASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 TATDN2P3-201ENST00000452855 3665 ntBASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
SHROOM1Q2M3G4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AC020978.6-201ENST00000571197 3177 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AC022613.3-201ENST00000560740 1346 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 RN7SKP86-201ENST00000410454 332 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AC244452.1-201ENST00000413798 141 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 CCNJP1-201ENST00000450600 1149 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AL358876.1-201ENST00000453364 1075 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AC012175.1-201ENST00000603755 531 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 COL6A4P1-202ENST00000487147 4317 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AC122713.2-201ENST00000624942 3335 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 API5P1-201ENST00000424316 1510 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 AC022507.1-201ENST00000548349 1505 ntBASIC7.88□□□□□ -1.15
SHROOM1Q2M3G4 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 AC087392.3-202ENST00000358446 1754 ntBASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 AL355974.1-201ENST00000618896 1708 ntBASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 VN1R12P-201ENST00000403778 876 ntBASIC7.87□□□□□ -1.15
SHROOM1Q2M3G4 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms