Protein–RNA interactions for Protein: P55210

CASP7, Caspase-7, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7P55210 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.52□□□□□ -1.05
CASP7P55210 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CASP7P55210 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CASP7P55210 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CASP7P55210 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CASP7P55210 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.51□□□□□ -1.05
CASP7P55210 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.51□□□□□ -1.05
CASP7P55210 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.51□□□□□ -1.05
CASP7P55210 HSPA8P19-201ENST00000505359 1517 ntBASIC8.51□□□□□ -1.05
CASP7P55210 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.51□□□□□ -1.05
CASP7P55210 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CASP7P55210 RN7SKP184-201ENST00000362348 333 ntBASIC8.51□□□□□ -1.05
CASP7P55210 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.51□□□□□ -1.05
CASP7P55210 MIR199B-201ENST00000384849 110 ntBASIC8.51□□□□□ -1.05
CASP7P55210 RNA5SP474-201ENST00000391234 90 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AC019178.1-201ENST00000392337 440 ntBASIC8.51□□□□□ -1.05
CASP7P55210 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 RSL24D1P1-201ENST00000404972 493 ntBASIC8.51□□□□□ -1.05
CASP7P55210 RN7SKP271-201ENST00000410528 320 ntBASIC8.51□□□□□ -1.05
CASP7P55210 RN7SKP188-201ENST00000410789 317 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.51□□□□□ -1.05
CASP7P55210 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.51□□□□□ -1.05
CASP7P55210 BX119917.1-201ENST00000432517 502 ntBASIC8.51□□□□□ -1.05
CASP7P55210 RPEP4-201ENST00000437636 602 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.51□□□□□ -1.05
CASP7P55210 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC8.51□□□□□ -1.05
CASP7P55210 GAPDHP20-201ENST00000444107 1007 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC8.51□□□□□ -1.05
CASP7P55210 RN7SL37P-201ENST00000490461 307 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AC021220.1-201ENST00000507445 630 ntBASIC8.51□□□□□ -1.05
CASP7P55210 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.51□□□□□ -1.05
CASP7P55210 RNA5SP318-201ENST00000516352 92 ntBASIC8.51□□□□□ -1.05
CASP7P55210 RNU6-964P-201ENST00000516524 69 ntBASIC8.51□□□□□ -1.05
CASP7P55210 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC8.51□□□□□ -1.05
CASP7P55210 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC8.51□□□□□ -1.05
CASP7P55210 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC8.51□□□□□ -1.05
CASP7P55210 OR9G2P-201ENST00000533326 880 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AC016144.1-201ENST00000548175 1087 ntBASIC8.51□□□□□ -1.05
CASP7P55210 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
CASP7P55210 AC005519.1-201ENST00000554490 601 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC8.51□□□□□ -1.05
CASP7P55210 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.51□□□□□ -1.05
CASP7P55210 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.51□□□□□ -1.05
CASP7P55210 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC8.51□□□□□ -1.05
CASP7P55210 AC138207.8-204ENST00000579588 527 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.51□□□□□ -1.05
CASP7P55210 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.51□□□□□ -1.05
CASP7P55210 AL049840.6-202ENST00000603373 279 ntBASIC8.51□□□□□ -1.05
CASP7P55210 GAPDHP41-201ENST00000613707 975 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AC104763.3-201ENST00000613765 618 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AC009032.1-201ENST00000617574 431 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AC091046.2-201ENST00000620775 665 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AC010872.1-201ENST00000624225 675 ntBASIC8.51□□□□□ -1.05
CASP7P55210 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC8.51□□□□□ -1.05
CASP7P55210 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.51□□□□□ -1.05
CASP7P55210 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CASP7P55210 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.51□□□□□ -1.05
CASP7P55210 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
CASP7P55210 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CASP7P55210 TET1P1-201ENST00000426627 2301 ntBASIC8.51□□□□□ -1.05
CASP7P55210 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CASP7P55210 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.5□□□□□ -1.05
CASP7P55210 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CASP7P55210 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CASP7P55210 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CASP7P55210 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CASP7P55210 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CASP7P55210 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.5□□□□□ -1.05
CASP7P55210 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CASP7P55210 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CASP7P55210 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CASP7P55210 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CASP7P55210 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CASP7P55210 AL033519.1-201ENST00000407266 307 ntBASIC8.5□□□□□ -1.05
CASP7P55210 MIR1204-201ENST00000408388 67 ntBASIC8.5□□□□□ -1.05
CASP7P55210 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.5□□□□□ -1.05
CASP7P55210 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.5□□□□□ -1.05
CASP7P55210 RN7SKP146-201ENST00000410242 334 ntBASIC8.5□□□□□ -1.05
CASP7P55210 ARMC4P1-201ENST00000438905 707 ntBASIC8.5□□□□□ -1.05
CASP7P55210 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC8.5□□□□□ -1.05
CASP7P55210 AL031681.1-201ENST00000443304 400 ntBASIC8.5□□□□□ -1.05
CASP7P55210 TVP23BP2-201ENST00000455082 615 ntBASIC8.5□□□□□ -1.05
CASP7P55210 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.5□□□□□ -1.05
CASP7P55210 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CASP7P55210 AC108729.1-201ENST00000487812 947 ntBASIC8.5□□□□□ -1.05
CASP7P55210 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms