Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CHGBP05060 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
CHGBP05060 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.19□□□□□ -1.1
CHGBP05060 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.19□□□□□ -1.1
CHGBP05060 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 AL451064.2-201ENST00000623514 1654 ntBASIC8.19□□□□□ -1.1
CHGBP05060 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.19□□□□□ -1.1
CHGBP05060 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CHGBP05060 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CHGBP05060 RNA5SP382-201ENST00000363355 112 ntBASIC8.19□□□□□ -1.1
CHGBP05060 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CHGBP05060 SNORA70G-201ENST00000383923 142 ntBASIC8.19□□□□□ -1.1
CHGBP05060 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.19□□□□□ -1.1
CHGBP05060 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.19□□□□□ -1.1
CHGBP05060 HSFY7P-201ENST00000432672 318 ntBASIC8.19□□□□□ -1.1
CHGBP05060 RPL3P11-201ENST00000434028 1146 ntBASIC8.19□□□□□ -1.1
CHGBP05060 HSFY8P-201ENST00000437934 318 ntBASIC8.19□□□□□ -1.1
CHGBP05060 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.19□□□□□ -1.1
CHGBP05060 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC8.19□□□□□ -1.1
CHGBP05060 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC8.19□□□□□ -1.1
CHGBP05060 BMS1P11-201ENST00000442351 885 ntBASIC8.19□□□□□ -1.1
CHGBP05060 GXYLT1P1-201ENST00000446657 490 ntBASIC8.19□□□□□ -1.1
CHGBP05060 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 AC073476.1-201ENST00000452854 407 ntBASIC8.19□□□□□ -1.1
CHGBP05060 HSFY5P-201ENST00000453726 309 ntBASIC8.19□□□□□ -1.1
CHGBP05060 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.19□□□□□ -1.1
CHGBP05060 BMS1P9-201ENST00000457640 885 ntBASIC8.19□□□□□ -1.1
CHGBP05060 RN7SL492P-201ENST00000460700 295 ntBASIC8.19□□□□□ -1.1
CHGBP05060 AC021220.1-201ENST00000507445 630 ntBASIC8.19□□□□□ -1.1
CHGBP05060 RN7SKP157-201ENST00000516174 282 ntBASIC8.19□□□□□ -1.1
CHGBP05060 IGHVIII-11-1-201ENST00000522733 267 ntBASIC8.19□□□□□ -1.1
CHGBP05060 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.19□□□□□ -1.1
CHGBP05060 OR4C49P-201ENST00000563891 900 ntBASIC8.19□□□□□ -1.1
CHGBP05060 AC007066.2-202ENST00000566531 914 ntBASIC8.19□□□□□ -1.1
CHGBP05060 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC8.19□□□□□ -1.1
CHGBP05060 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.19□□□□□ -1.1
CHGBP05060 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC8.19□□□□□ -1.1
CHGBP05060 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC8.19□□□□□ -1.1
CHGBP05060 AL354718.1-201ENST00000619764 589 ntBASIC8.19□□□□□ -1.1
CHGBP05060 AL138693.1-201ENST00000622219 129 ntBASIC8.19□□□□□ -1.1
CHGBP05060 ZNF806-201ENST00000438300 1774 ntBASIC8.19□□□□□ -1.1
CHGBP05060 AL133243.4-201ENST00000623116 3109 ntBASIC8.19□□□□□ -1.1
CHGBP05060 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.19□□□□□ -1.1
CHGBP05060 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHGBP05060 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CHGBP05060 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.19□□□□□ -1.1
CHGBP05060 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 AC092701.1-201ENST00000623627 1551 ntBASIC8.18□□□□□ -1.1
CHGBP05060 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.18□□□□□ -1.1
CHGBP05060 AC023632.6-201ENST00000624338 2177 ntBASIC8.18□□□□□ -1.1
CHGBP05060 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.18□□□□□ -1.1
CHGBP05060 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.18□□□□□ -1.1
CHGBP05060 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CHGBP05060 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.18□□□□□ -1.1
CHGBP05060 SNORA7A-201ENST00000384765 139 ntBASIC8.18□□□□□ -1.1
CHGBP05060 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CHGBP05060 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.18□□□□□ -1.1
CHGBP05060 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.18□□□□□ -1.1
CHGBP05060 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.18□□□□□ -1.1
CHGBP05060 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CHGBP05060 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC8.18□□□□□ -1.1
CHGBP05060 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 PFN1P11-201ENST00000445829 389 ntBASIC8.18□□□□□ -1.1
CHGBP05060 AC002486.2-201ENST00000447806 590 ntBASIC8.18□□□□□ -1.1
CHGBP05060 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.18□□□□□ -1.1
CHGBP05060 RN7SL216P-201ENST00000471607 298 ntBASIC8.18□□□□□ -1.1
CHGBP05060 SNX18P23-201ENST00000510867 677 ntBASIC8.18□□□□□ -1.1
CHGBP05060 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.18□□□□□ -1.1
CHGBP05060 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CHGBP05060 SNORA70D-201ENST00000578836 135 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms