Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDS5AQ29RF7 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.11□□□□□ -1.11
PDS5AQ29RF7 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 RNA5SP65-201ENST00000363166 119 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 RN7SKP296-201ENST00000411185 341 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AL929472.1-201ENST00000417484 429 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 LINC00328-2P-201ENST00000436585 219 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AL020997.1-201ENST00000446554 349 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 GUSBP9-201ENST00000510138 584 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 SCARNA5-201ENST00000516201 276 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 RN7SKP183-201ENST00000517169 324 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 TDGP1-201ENST00000543961 1229 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AC037479.1-201ENST00000558361 625 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AC089999.3-201ENST00000622440 577 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 RPSAP68-201ENST00000625020 438 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 TSHZ2-205ENST00000626626 670 ntBASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.1□□□□□ -1.11
PDS5AQ29RF7 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 SNORA38B-201ENST00000363524 131 ntBASIC8.09□□□□□ -1.11
PDS5AQ29RF7 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AC021074.2-201ENST00000468434 172 ntBASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 AC018692.2-201ENST00000624130 348 ntBASIC8.09□□□□□ -1.11
PDS5AQ29RF7 MAPK10-383ENST00000642032 3390 ntBASIC8.09□□□□□ -1.11
PDS5AQ29RF7 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
PDS5AQ29RF7 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.12
PDS5AQ29RF7 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
PDS5AQ29RF7 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 U3.52-201ENST00000384034 216 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 RNA5SP198-201ENST00000410376 127 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AL359092.1-201ENST00000417156 265 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 THEM7P-201ENST00000419556 672 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AL645939.3-201ENST00000435408 225 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 OR52E7P-201ENST00000452394 933 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 RN7SL413P-201ENST00000482700 297 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AC117395.1-201ENST00000487390 403 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AC124891.1-201ENST00000536322 519 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms